Factsheet for GSMUA_Achr5P09690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00870_001	Banana	cytosol	55.39	64.85
TraesCS7B01G444900.1	Wheat	cytosol	53.94	58.18
TraesCS7D01G516200.1	Wheat	cytosol	53.06	57.23
HORVU7Hr1G116830.1	Barley	cytosol	52.48	56.6
Zm00001d011208_P001	Maize	cytosol	52.19	56.47
VIT_11s0016g02380.t01	Wine grape	cytosol	50.15	56.21
OQU87044	Sorghum	cytosol	51.9	55.45
PGSC0003DMT400005971	Potato	cytosol	48.4	55.15
Os01t0580500-01	Rice	cytosol	50.15	55.13
CDY70340	Canola	cytosol	48.4	54.97
Solyc07g026650.2.1	Tomato	cytosol	47.81	54.49
AT2G19590.1	Thale cress	cytosol	48.98	54.19
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	48.69	53.87
KRH60136	Soybean	endoplasmic reticulum	48.1	53.75
KRH41426	Soybean	cytosol	47.81	53.42
Bra031090.1-P	Field mustard	cytosol	46.94	53.31
CDX81937	Canola	cytosol	48.1	53.23
CDY21655	Canola	cytosol	47.52	52.58
KRH49052	Soybean	cytosol	46.36	51.96
GSMUA_Achr1P18250_001	Banana	cytosol	40.82	44.44
GSMUA_Achr7P18420_001	Banana	cytosol	39.65	42.77
GSMUA_Achr6P12910_001	Banana	cytosol	37.9	42.21
GSMUA_AchrUn_...	Banana	cytosol	13.12	41.67
CDX68962	Canola	cytosol	11.95	40.2
GSMUA_Achr10P...	Banana	cytosol	37.61	38.74
GSMUA_AchrUn_...	Banana	cytosol	30.61	38.46
GSMUA_AchrUn_...	Banana	cytosol	29.74	37.5
GSMUA_AchrUn_...	Banana	cytosol	14.29	31.61
GSMUA_AchrUn_...	Banana	cytosol	14.29	31.61
GSMUA_AchrUn_...	Banana	cytosol	31.2	18.61

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr5G09690_001	EnsemblPlants:GSMUA_Achr5P09690_001	EnsemblPlants:GSMUA_Achr5T09690_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
UniProt:M0SX48	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF103	SUPFAM:SSF51197	UniParc:UPI00029601E5	:	:	:

Description

Putative 1-aminocyclopropane-1-carboxylate oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr5G09690_001]

Coordinates

chr5:-:6911660..6914329

Molecular Weight (calculated)

39078.0 Da

IEP (calculated)

5.729

GRAVY (calculated)

-0.452

Length

343 amino acids

Sequence
(BLAST)

001: MEVPVIDLAE FESEERSKAM SRFHQVCGNW GFFWVENHGV AVALMEEMKR HVYSHYDKCL KERFYDSELA KGLGPQTDAA EVDWETTYFV QHQPESSTED
101: DLGLGVEFRE AMDAYVSQLT KLAEKLAELV SENLGLDDDH LKKTFAPPFV GTKVAMYPQC PQPELVTGLR GHSDAGGIIL LLQDDTVPGL EFYKDGEWVP
201: VTPNKGNRIF VNFGDQVEVV SNGLYRSMWH RVLADKHGSR LSVATFYNPG GDAIVGPAPK LLYPGGYRFQ DYLHYYFGTK FSDKGARFQA VKEMLENYQS
301: NGGRSSSYEQ KYSCCWRLLQ QQLLYFCCVH HSAYHFRNKG YTS

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.