Factsheet for VIT_11s0016g02380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60136	Soybean	endoplasmic reticulum	74.18	73.94
KRH49052	Soybean	cytosol	73.2	73.2
PGSC0003DMT400005971	Potato	cytosol	71.9	73.09
KRH41426	Soybean	cytosol	72.88	72.64
Solyc07g026650.2.1	Tomato	cytosol	70.59	71.76
AT2G19590.1	Thale cress	cytosol	70.92	70.0
CDY70340	Canola	cytosol	68.63	69.54
Bra031090.1-P	Field mustard	cytosol	68.3	69.21
CDX81937	Canola	cytosol	69.93	69.03
CDY21655	Canola	cytosol	68.95	68.06
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	68.3	67.42
OQU76609	Sorghum	cytosol	59.15	61.77
GSMUA_Achr6P00870_001	Banana	cytosol	58.82	61.43
Zm00001d036955_P001	Maize	cytosol	57.84	60.41
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	57.52	60.07
Zm00001d015860_P001	Maize	cytosol	45.75	59.83
Zm00001d005927_P001	Maize	cytosol	44.12	59.73
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	57.19	59.73
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	56.54	59.04
HORVU7Hr1G086650.1	Barley	cytosol	56.54	59.04
CDX68962	Canola	cytosol	19.28	57.84
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	39.54	56.02
VIT_00s2086g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	37.25	55.07
TraesCS7D01G516200.1	Wheat	cytosol	52.61	50.63
Zm00001d011208_P001	Maize	cytosol	52.29	50.47
TraesCS7B01G444900.1	Wheat	cytosol	52.29	50.31
VIT_12s0059g01380.t01	Wine grape	cytosol	52.29	50.31
GSMUA_Achr5P09690_001	Banana	cytosol	56.21	50.15
OQU87044	Sorghum	cytosol	51.96	49.53
HORVU7Hr1G116830.1	Barley	cytosol	50.98	49.06
Os01t0580500-01	Rice	cytosol	49.67	48.72
VIT_18s0001g01840.t01	Wine grape	cytosol	44.77	46.92

Protein Annotations

EntrezGene:100257676	wikigene:100257676	MapMan:11.5.1.2	Gene3D:2.60.120.330	ProteinID:AFU66006	ProteinID:AFU66006.1
EMBL:AM427708	ProteinID:CAN80122	ProteinID:CAN80122.1	ProteinID:CBI27928	ProteinID:CBI27928.3	ncoils:Coil
UniProt:D7TB93	InterPro:DIOX_N	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EMBL:JX446623	EntrezGene:LOC100257676	wikigene:LOC100257676	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF103	SUPFAM:SSF51197
UniParc:UPI00015C8A3E	ArrayExpress:VIT_11s0016g02380	EnsemblPlantsGene:VIT_11s0016g02380	EnsemblPlants:VIT_11s0016g02380.t01	RefSeq:XP_002279746	RefSeq:XP_002279746.2

Description

1-aminocyclopropane-1-carboxylic acid oxidase 3 [Source:UniProtKB/TrEMBL;Acc:D7TB93]

Coordinates

chr11:-:1906308..1907599

Molecular Weight (calculated)

34986.7 Da

IEP (calculated)

6.294

GRAVY (calculated)

-0.518

Length

306 amino acids

Sequence
(BLAST)

001: MEVPMIDFDK LDGEKRAETK ALLHQACEKW GFFQIDNHGV DKKLMEKVKH LVNTHYEEIM KRSFYESEIA KALEDKETAS NIDWESSFFL WHRPTSNIDE
101: FTNISEDLRK TMDEYIAQLF KLAEKLSELM CENLGLEKGY IREAFSGNAG PSVGTKVAKY PQCPRPELVR GLREHTDAGG IILLLQDDQV PGLEFYKDGE
201: WVVIPPSKNN TIFVNTGDQI EVLSNGRYKS TLHRVMADKN GSRLSIATFY NPSGDAIISP APKLLYPDHF RFQDYLKLYA TTKFADKGPR FESMKNMAIG
301: HHSLHA

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.