Factsheet for GSMUA_Achr6P00870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	64.85	64.85
Zm00001d015860_P001	Maize	cytosol	51.54	64.53
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	64.51	64.51
HORVU7Hr1G086650.1	Barley	cytosol	64.16	64.16
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	64.16	64.16
OQU76609	Sorghum	cytosol	63.82	63.82
Zm00001d005927_P001	Maize	cytosol	48.81	63.27
Zm00001d036955_P001	Maize	cytosol	62.8	62.8
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	44.71	60.65
VIT_11s0016g02380.t01	Wine grape	cytosol	61.43	58.82
PGSC0003DMT400005971	Potato	cytosol	59.39	57.81
Solyc07g026650.2.1	Tomato	cytosol	59.04	57.48
CDY70340	Canola	cytosol	59.04	57.28
KRH60136	Soybean	endoplasmic reticulum	59.04	56.35
KRH41426	Soybean	cytosol	59.04	56.35
KRH49052	Soybean	cytosol	58.7	56.21
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	59.04	55.81
AT2G19590.1	Thale cress	cytosol	59.04	55.81
Bra031090.1-P	Field mustard	cytosol	57.34	55.63
GSMUA_Achr5P09690_001	Banana	cytosol	64.85	55.39
CDX81937	Canola	cytosol	58.36	55.16
CDY21655	Canola	cytosol	57.68	54.52
GSMUA_Achr1P18250_001	Banana	cytosol	52.9	49.21
GSMUA_Achr7P18420_001	Banana	cytosol	50.51	46.54
GSMUA_AchrUn_...	Banana	cytosol	16.72	45.37
GSMUA_Achr6P12910_001	Banana	cytosol	46.42	44.16
GSMUA_AchrUn_...	Banana	cytosol	38.23	41.03
GSMUA_Achr10P...	Banana	cytosol	45.05	39.64
GSMUA_AchrUn_...	Banana	cytosol	36.52	39.34
CDX68962	Canola	cytosol	13.65	39.22
GSMUA_AchrUn_...	Banana	cytosol	18.43	34.84
GSMUA_AchrUn_...	Banana	cytosol	18.09	34.19
GSMUA_AchrUn_...	Banana	cytosol	38.57	19.65

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr6G00870_001	EnsemblPlants:GSMUA_Achr6P00870_001	EnsemblPlants:GSMUA_Achr6T00870_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
UniProt:M0T335	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF103	SUPFAM:SSF51197	UniParc:UPI000295383A	SEG:seg	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr6G00870_001]

Coordinates

chr6:+:598708..599734

Molecular Weight (calculated)

33251.6 Da

IEP (calculated)

5.255

GRAVY (calculated)

-0.376

Length

293 amino acids

Sequence
(BLAST)

001: MEIPVINLGE LEGEKRSKTM SLLHDACQKW GFFWLENHGI EDGVMEEVKQ LVKQHYEESM RESFYESELA QGLRRGTKAS DVDWETSFFY RHRPDPNIND
101: LPELVRDAMK QYVEQVVKLA EKLAELLSEN LGLANTYLKN AFAEPFVGTK VAMYPKCSNP ELVMGLRGHT DAGGIILLLQ DDTVPGLEFL KDGEWVAVPP
201: AQGHRIFVNL GDQVEVVSNG VYKSIRHRVL ADGTGSRLSI ATFYNPGADA IISPAAELVY PSRYRFQDYL DYYTKTKFSD KASRFQNMKQ TLV

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.