Factsheet for TraesCS7A01G363900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	98.63	98.63
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	97.61	97.61
HORVU7Hr1G086650.1	Barley	cytosol	94.88	94.88
OQU76609	Sorghum	cytosol	83.62	83.62
Zm00001d015860_P001	Maize	cytosol	63.82	79.91
Zm00001d036955_P001	Maize	cytosol	79.86	79.86
Zm00001d005927_P001	Maize	cytosol	60.41	78.32
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	57.34	77.78
GSMUA_Achr6P00870_001	Banana	cytosol	64.51	64.51
VIT_11s0016g02380.t01	Wine grape	cytosol	60.07	57.52
KRH49052	Soybean	cytosol	58.02	55.56
PGSC0003DMT400005971	Potato	cytosol	56.66	55.15
KRH60136	Soybean	endoplasmic reticulum	57.0	54.4
CDY70340	Canola	cytosol	55.97	54.3
Solyc07g026650.2.1	Tomato	cytosol	55.63	54.15
AT2G19590.1	Thale cress	cytosol	57.0	53.87
KRH41426	Soybean	cytosol	56.31	53.75
Bra031090.1-P	Field mustard	cytosol	54.61	52.98
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	55.97	52.9
CDX81937	Canola	cytosol	55.63	52.58
CDY21655	Canola	cytosol	54.95	51.94
TraesCS6A01G325500.1	Wheat	cytosol	44.37	44.67
TraesCS5A01G234300.1	Wheat	cytosol	47.78	43.89
TraesCS1A01G089500.1	Wheat	cytosol	45.73	43.51
TraesCS1A01G089600.1	Wheat	cytosol	45.73	43.51
TraesCS5A01G234200.1	Wheat	cytosol	47.1	43.26
TraesCS6A01G325400.1	Wheat	cytosol	48.46	43.16
TraesCS6A01G325600.1	Wheat	cytosol	48.12	42.86
TraesCS6A01G325700.1	Wheat	cytosol	47.44	41.99
TraesCS4A01G221300.1	Wheat	cytosol	44.71	41.85
CDX68962	Canola	cytosol	12.97	37.25

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0006950
GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991
GO:GO:0016491	GO:GO:0051365	GO:GO:0055114	GO:GO:0071281	GO:GO:0071398	GO:GO:0071732
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF103	SUPFAM:SSF51197	EnsemblPlantsGene:TraesCS7A01G363900	EnsemblPlants:TraesCS7A01G363900.1

Description

No Description!

Coordinates

chr7A:-:538362598..538363699

Molecular Weight (calculated)

33527.2 Da

IEP (calculated)

7.062

GRAVY (calculated)

-0.386

Length

293 amino acids

Sequence
(BLAST)

001: MEIPVIKMDE LHGEKRSETL ALLHDACAQW GFFWLENHGI NDDLMDRTKK LVNKHYEQNM EKNFYSSEIA KTIGPDKVTS NVDWECSFMY HHQPKSNIHD
101: IPELLRTTVP EYAEEVVKLA EQLAEVMSEN LGLDKNYLKK AFTKPSIGIK VAKYPRCSHP EVVMGLRGHT DAGGIILLFQ DDLVPGLQFM KDGRWISIPP
201: TKGNRIFVNL GDQIEVISNG IYKSICHQVL PNQNGSRLSI ATFYNPGADA IIFPAPNLTY PSQYRFQDYL NFYSATKFTD KVSRFQTTKM VFK

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.