Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G117400.1 | Wheat | cytosol | 99.03 | 99.03 |
| TraesCS1D01G098000.1 | Wheat | cytosol | 99.03 | 99.03 |
| HORVU1Hr1G020450.1 | Barley | cytosol | 98.38 | 98.38 |
| TraesCS1A01G089600.1 | Wheat | cytosol | 97.73 | 97.73 |
| Os05t0149400-01 | Rice | plasma membrane | 86.69 | 86.69 |
| EES17716 | Sorghum | cytosol | 84.42 | 82.28 |
| Zm00001d024843_P001 | Maize | cytosol | 83.77 | 82.17 |
| EES19027 | Sorghum | cytosol | 84.09 | 81.96 |
| Os05t0149300-00 | Rice | cytosol, peroxisome | 49.03 | 81.18 |
| Zm00001d024852_P001 | Maize | cytosol | 82.47 | 80.63 |
| Zm00001d024850_P001 | Maize | cytosol | 81.82 | 80.0 |
| Zm00001d024851_P001 | Maize | cytosol | 81.82 | 80.0 |
| Zm00001d024853_P001 | Maize | plastid | 82.47 | 71.35 |
| KRH64615 | Soybean | cytosol | 65.91 | 65.91 |
| KRH53298 | Soybean | nucleus | 65.58 | 65.8 |
| CDX88361 | Canola | cytosol | 17.21 | 65.43 |
| CDX88360 | Canola | cytosol | 20.13 | 65.26 |
| VIT_18s0001g01840.t01 | Wine grape | cytosol | 61.04 | 64.38 |
| AT1G77330.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 63.96 | 64.17 |
| CDY38352 | Canola | cytosol | 63.64 | 63.64 |
| CDY72562 | Canola | cytosol | 48.05 | 63.25 |
| PGSC0003DMT400030740 | Potato | cytosol | 63.96 | 62.94 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 62.66 | 62.87 |
| Bra003687.1-P | Field mustard | cytosol | 62.01 | 62.62 |
| TraesCS4A01G221300.1 | Wheat | cytosol | 63.64 | 62.62 |
| Bra008302.1-P | Field mustard | cytosol | 57.47 | 62.32 |
| Solyc06g060070.2.1 | Tomato | cytosol | 63.31 | 62.1 |
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 57.14 | 61.97 |
| GSMUA_Achr10P... | Banana | cytosol | 66.88 | 61.86 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 62.99 | 61.39 |
| PGSC0003DMT400015435 | Potato | cytoskeleton, cytosol, peroxisome | 61.69 | 59.56 |
| Bra015675.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 59.09 | 58.9 |
| TraesCS6A01G325500.1 | Wheat | cytosol | 48.05 | 50.86 |
| TraesCS6A01G325400.1 | Wheat | cytosol | 52.6 | 49.24 |
| TraesCS5A01G234200.1 | Wheat | cytosol | 50.97 | 49.22 |
| TraesCS6A01G325600.1 | Wheat | cytosol | 52.27 | 48.94 |
| TraesCS5A01G234300.1 | Wheat | cytosol | 50.32 | 48.59 |
| TraesCS6A01G325700.1 | Wheat | cytosol | 51.3 | 47.73 |
| TraesCS7A01G363900.1 | Wheat | cytoskeleton, cytosol, peroxisome | 43.51 | 45.73 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G089500.1 | EnsemblPlantsGene:TraesCS1A01G089500 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | ncoils:Coil | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF394 | PFAM:PF03171 |
| PFAM:PF14226 | PFscan:PS51471 | SUPFAM:SSF51197 | MapMan:11.5.1.2 | : | : |
Description
No Description!
Coordinates
chr1A:-:78963462..78964510
Molecular Weight (calculated)
34423.8 Da
IEP (calculated)
4.619
GRAVY (calculated)
-0.366
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVPVIDFSK LDGAERAETM AQIADGCENW GFFQLVNHGI PLELLDCVKK VCSESYRLRE AAFRSSEPVQ TLERLVEAER RGEAVAPVDD MDWEDIFYLH
101: DDNQWPSDPP AFKETMREYR AELKKLAERV MEAMDENLGL DKGRMKAAFT GDGLLAPFFG TKVSHYPPCP RPDLITGLRA HTDAGGVILL FQDDKVGGLE
201: VLKDGEWLDV QPLPDAIVVN TGDQVEVLSN GRYRSAWHRV LPMRNGNRRS IASFYNPAFE AAISPAVGEG AAAAYPDYVF GDYMDVYNKQ KFDAKEPRFE
301: AVKAPKAA
101: DDNQWPSDPP AFKETMREYR AELKKLAERV MEAMDENLGL DKGRMKAAFT GDGLLAPFFG TKVSHYPPCP RPDLITGLRA HTDAGGVILL FQDDKVGGLE
201: VLKDGEWLDV QPLPDAIVVN TGDQVEVLSN GRYRSAWHRV LPMRNGNRRS IASFYNPAFE AAISPAVGEG AAAAYPDYVF GDYMDVYNKQ KFDAKEPRFE
301: AVKAPKAA
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.