CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17716	Sorghum	cytosol	96.84	96.84
Zm00001d024843_P001	Maize	cytosol	93.04	93.63
Zm00001d024852_P001	Maize	cytosol	93.04	93.33
Zm00001d024851_P001	Maize	cytosol	92.41	92.7
Zm00001d024850_P001	Maize	cytosol	92.41	92.7
HORVU1Hr1G020450.1	Barley	cytosol	83.23	85.39
TraesCS1D01G098000.1	Wheat	cytosol	82.59	84.74
TraesCS1B01G117500.1	Wheat	cytosol	82.59	84.74
TraesCS1B01G117400.1	Wheat	cytosol	81.96	84.09
TraesCS1A01G089600.1	Wheat	cytosol	81.96	84.09
TraesCS1A01G089500.1	Wheat	cytosol	81.96	84.09
TraesCS1D01G098100.1	Wheat	cytosol	81.65	83.77
HORVU1Hr1G020410.2	Barley	cytosol	81.96	83.55
Zm00001d024853_P001	Maize	plastid	93.35	82.87
Os05t0149400-01	Rice	plasma membrane	79.75	81.82
Os05t0149300-00	Rice	cytosol, peroxisome	45.25	76.88
HORVU1Hr1G020430.1	Barley	peroxisome	65.51	66.77
CDX88361	Canola	cytosol	17.09	66.67
CDX88360	Canola	cytosol	19.62	65.26
EES09442	Sorghum	cytosol	65.19	64.98
KRH64615	Soybean	cytosol	63.29	64.94
KRH53298	Soybean	nucleus	62.97	64.82
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	62.34	64.17
GSMUA_Achr10P...	Banana	cytosol	67.41	63.96
VIT_18s0001g01840.t01	Wine grape	cytosol	58.86	63.7
EES08130	Sorghum	cytosol	63.61	63.61
CDY72562	Canola	cytosol	46.84	63.25
CDY38352	Canola	cytosol	61.39	62.99
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	56.01	62.32
PGSC0003DMT400030740	Potato	cytosol	61.71	62.3
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	60.44	62.22
Bra008302.1-P	Field mustard	cytosol	55.7	61.97
Solyc06g060070.2.1	Tomato	cytosol	61.08	61.47
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	61.39	61.39
Bra003687.1-P	Field mustard	cytosol	59.18	61.31
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	57.28	58.58
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	58.23	57.68
EES05870	Sorghum	cytosol	48.1	47.65
EER98995	Sorghum	cytosol	48.1	46.2
OQU76609	Sorghum	cytosol	41.46	44.71
OQU87044	Sorghum	cytosol	43.35	42.68

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:8075978	UniProt:C5Z038	ncoils:Coil	InterPro:DIOX_N
EnsemblPlants:EES19027	ProteinID:EES19027	ProteinID:EES19027.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF394	EnsemblPlantsGene:SORBI_3009G044400
SUPFAM:SSF51197	UniParc:UPI0001A88C13	RefSeq:XP_002440597.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:4247819..4249119

Molecular Weight (calculated)

35072.6 Da

IEP (calculated)

4.943

GRAVY (calculated)

-0.353

Length

316 amino acids

Sequence
(BLAST)

001: MVVPVIDFSK LELDGAERAE TLEQIANGCE AWGFFQLVNH GIPLELLERV KKVCSDCYRL REAGFKASEP VRTLEALVAA EQRGEEVAPV DDLDWEDIFY
101: IHDGCQWPSD PPAFKETMRE YRAELRKLAE RVMEAMDENL GLDRGTIKAA FSGDGRREPF FGTKVSHYPP CPRPDLITGL RAHTDAGGVI LLFQDDRVGG
201: LEVLKDGQWT DVQPLAGAIV VNTGDQIEVL SNGRYRSAWH RVLPMRDGNR RSIASFYNPA NEATISPAAV ATSGGAAYPK YMFGDYMDVY VKQKFQAKEP
301: RFEAVKAAAP KSSPAA

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.