CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020686_P001	Maize	cytosol	88.75	89.57
TraesCS5B01G232600.1	Wheat	cytosol	82.98	86.12
TraesCS5A01G234300.1	Wheat	cytosol	82.98	85.58
TraesCS5A01G234200.1	Wheat	cytosol	82.98	85.58
TraesCS5D01G241000.1	Wheat	cytosol	82.07	85.17
TraesCS5D01G241100.1	Wheat	cytosol	82.07	84.64
TraesCS5B01G232700.1	Wheat	cytosol	81.16	84.23
Os09t0451000-01	Rice	cytosol	82.07	83.85
Os09t0451400-01	Rice	cytosol	82.07	83.85
HORVU5Hr1G067490.2	Barley	cytosol	74.16	83.56
GSMUA_Achr7P18420_001	Banana	cytosol	70.52	72.96
EES05870	Sorghum	cytosol	70.21	72.41
GSMUA_AchrUn_...	Banana	cytosol	23.71	72.22
GSMUA_Achr1P18250_001	Banana	cytosol	63.83	66.67
EES19027	Sorghum	cytosol	46.2	48.1
EES09442	Sorghum	cytosol	45.9	47.63
EES17716	Sorghum	cytosol	45.59	47.47
EES08130	Sorghum	cytosol	44.98	46.84
OQU76609	Sorghum	cytosol	41.34	46.42
OQU87044	Sorghum	cytosol	40.73	41.74

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:8081032	UniProt:C5X274	InterPro:DIOX_N	EnsemblPlants:EER98995
ProteinID:EER98995	ProteinID:EER98995.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF383	EnsemblPlantsGene:SORBI_3002G221900	SUPFAM:SSF51197
unigene:Sbi.10774	UniParc:UPI0001A84125	RefSeq:XP_002462474.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:61366556..61368022

Molecular Weight (calculated)

36486.5 Da

IEP (calculated)

4.861

GRAVY (calculated)

-0.210

Length

329 amino acids

Sequence
(BLAST)

001: MAPALSFPII DMGLLAGEER PAAMELLRDA CENWGFFEIL NHGISTELMD EVEKLTKDHY KRVREQRFLD FASKTLADAK AAENLDWEST FFVRHLPESN
101: LAEIPDLDDG YRRVMRRFAG ELEALAERLL DLLCENLGLE GGYLARAFRG RSTGAPTFGT KVSSYPPCPR PDLVSGLRAH TDAGGIILLF QDDRVGGLQL
201: LKGGEWVDVP PLRHAIVVNL GDQLEVVTNG AYKSVMHRVV AQPDGNRMSI ASFYNPGSDA VIFPAPALVN KAQDQEAAAG NGDGVGVYPR FVFEDYMKLY
301: VRHKFEAKEP RFEAFRSMET DSSNCIAIA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.