CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018211_P001	Maize	extracellular	91.85	92.43
Zm00001d052136_P001	Maize	cytosol	88.71	87.62
Os02t0771600-01	Rice	cytosol	86.83	86.29
TraesCS6A01G325500.1	Wheat	cytosol	76.49	83.85
TraesCS6B01G356200.1	Wheat	cytosol	86.83	83.69
TraesCS6B01G356000.1	Wheat	cytosol	85.89	83.28
TraesCS6D01G305400.1	Wheat	cytosol	86.21	83.08
TraesCS6D01G305200.1	Wheat	cytosol	86.21	83.08
TraesCS6A01G325600.1	Wheat	cytosol	85.58	82.98
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	86.21	82.83
TraesCS6B01G355700.1	Wheat	cytosol	85.58	82.73
TraesCS6B01G355900.1	Wheat	cytosol	85.58	82.48
TraesCS6A01G325700.1	Wheat	cytosol	85.27	82.18
TraesCS6A01G325400.1	Wheat	cytosol	84.01	81.46
TraesCS6B01G355800.1	Wheat	extracellular	84.33	77.97
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	85.89	76.54
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	84.33	75.99
GSMUA_Achr7P18420_001	Banana	cytosol	70.22	70.44
GSMUA_AchrUn_...	Banana	cytosol	23.82	70.37
EER98995	Sorghum	cytosol	72.41	70.21
GSMUA_Achr1P18250_001	Banana	cytosol	68.34	69.21
EES19027	Sorghum	cytosol	47.65	48.1
EES17716	Sorghum	cytosol	47.65	48.1
OQU76609	Sorghum	cytosol	42.63	46.42
EES09442	Sorghum	cytosol	46.08	46.37
EES08130	Sorghum	cytosol	45.14	45.57
OQU87044	Sorghum	cytosol	41.69	41.43

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:8078948	UniProt:C5XTH3	ncoils:Coil	InterPro:DIOX_N
EnsemblPlants:EES05870	ProteinID:EES05870	ProteinID:EES05870.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF179	EnsemblPlantsGene:SORBI_3004G313100
SUPFAM:SSF51197	unigene:Sbi.8393	UniParc:UPI0001A859E1	RefSeq:XP_002452894.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:64990568..64993143

Molecular Weight (calculated)

35518.1 Da

IEP (calculated)

4.788

GRAVY (calculated)

-0.272

Length

319 amino acids

Sequence
(BLAST)

001: MAATASFPVV NMEKLETEEK ATAMEIIRDA CENWGFFELL NHGISHELMD EVERLTKAHY ANFREAKFQE FAARTLEAGD KGADVKDVDW ESTFFVRHLP
101: ASNLADLPDV DDHYRQVMKQ FASEIQKLSE KLLDLLCENL GLEPGYLKSA FAGSNGPTFG TKVSAYPPCP RPDLVDGLRA HTDAGGIILL FQDDQVSGLQ
201: LLKDGEWVDV PPMRHAIVVN IGDQLEVITN GRYKSVMHRV LTRPDGNRMS IASFYNPGAD AVIFPAPALV GAAGAEEERA GQATYPRFVF EDYMNLYVRH
301: KFEAKEPRFE AMKSAIATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.