Factsheet for HORVU6Hr1G079640.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

cytosol 3
peroxisome 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G356000.1	Wheat	cytosol	91.57	92.4
TraesCS6D01G305200.1	Wheat	cytosol	91.87	92.14
TraesCS6B01G356200.1	Wheat	cytosol	91.57	91.84
TraesCS6B01G355900.1	Wheat	cytosol	91.27	91.54
TraesCS6D01G305400.1	Wheat	cytosol	91.27	91.54
TraesCS6A01G325700.1	Wheat	cytosol	90.66	90.94
TraesCS6B01G355700.1	Wheat	cytosol	89.76	90.3
TraesCS6A01G325500.1	Wheat	cytosol	78.61	89.69
TraesCS6A01G325400.1	Wheat	cytosol	88.86	89.67
TraesCS6A01G325600.1	Wheat	cytosol	88.55	89.36
EES05870	Sorghum	cytosol	82.83	86.21
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	92.77	86.03
TraesCS6B01G355800.1	Wheat	extracellular	89.16	85.8
Os02t0771600-01	Rice	cytosol	82.83	85.67
Zm00001d018211_P001	Maize	extracellular	80.72	84.54
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	87.35	81.92
Zm00001d052136_P001	Maize	cytosol	77.41	79.57
GSMUA_Achr7P18420_001	Banana	cytosol	67.47	70.44
GSMUA_Achr1P18250_001	Banana	cytosol	65.06	68.57
HORVU5Hr1G067490.2	Barley	cytosol	59.04	67.12
GSMUA_AchrUn_...	Banana	cytosol	21.69	66.67
HORVU1Hr1G020410.2	Barley	cytosol	48.19	51.61
HORVU1Hr1G020450.1	Barley	cytosol	47.59	51.3
HORVU7Hr1G086650.1	Barley	cytosol	42.77	48.46
HORVU4Hr1G017660.1	Barley	cytosol	45.18	47.47
HORVU7Hr1G116830.1	Barley	cytosol	39.16	40.88
HORVU1Hr1G020430.1	Barley	peroxisome	36.75	39.35

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:HORVU6Hr1G079640	EnsemblPlants:HORVU6Hr1G079640.3	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0WSH8
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF179
SUPFAM:SSF51197	UniParc:UPI000296E05A	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:538289659..538291563

Molecular Weight (calculated)

36776.6 Da

IEP (calculated)

4.715

GRAVY (calculated)

-0.258

Length

332 amino acids

Sequence
(BLAST)

001: MAIPANAAAT SLSFPVIHME KLETEERGAA MEVIRDACEN WGFFELLNHG ISHELMDEVE RVSKAHYAAC REEQFKEFAA RTLEAGEKGA DVKDVDWEST
101: FFVRHLPASN LADLPNLDHH YRQVMKEFAS EIEKLAEKVL DLLCENLGLE EGYLKRAFTG SNGPTFGTKV SSYPPCPRPD LVDGLRAHTD AGGVILLFQD
201: DQVSGLQLLK DGAWVDVPPM RHAVVVNIGD QLEVITNGRY KSVMHRVLTR PDGNRMSVAS FYNPGADAVI FPAPALMGAA EAAGKNEGEE GTAEYPSFVF
301: EDYMNLYLRH KFEAKEPRFE AMKVDAAPIA TV

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.