Factsheet for TraesCS6B01G355800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 1
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G325500.1	Wheat	cytosol	78.26	92.78
TraesCS6B01G355900.1	Wheat	cytosol	86.96	90.63
TraesCS6B01G356000.1	Wheat	cytosol	85.22	89.36
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	85.8	89.16
TraesCS6B01G356200.1	Wheat	cytosol	85.51	89.12
TraesCS6B01G355700.1	Wheat	cytosol	83.77	87.58
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	87.83	85.59
Os02t0771600-01	Rice	cytosol	78.55	84.42
EES05870	Sorghum	cytosol	77.97	84.33
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	85.22	82.12
Zm00001d018211_P001	Maize	extracellular	75.36	82.02
Zm00001d052136_P001	Maize	cytosol	73.91	78.95
GSMUA_AchrUn_...	Banana	cytosol	22.61	72.22
TraesCS5B01G232600.1	Wheat	cytosol	65.51	71.29
GSMUA_Achr7P18420_001	Banana	cytosol	64.93	70.44
TraesCS5B01G232700.1	Wheat	cytosol	64.06	69.72
GSMUA_Achr1P18250_001	Banana	cytosol	62.32	68.25
TraesCS1B01G117400.1	Wheat	cytosol	45.51	50.97
TraesCS1B01G117500.1	Wheat	cytosol	44.93	50.32
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	39.71	46.76
TraesCS7B01G444900.1	Wheat	cytosol	39.13	42.45

Protein Annotations

EnsemblPlants:TraesCS6B01G355800.1	EnsemblPlantsGene:TraesCS6B01G355800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF179	PFAM:PF03171	PFscan:PS51471
SEG:seg	SUPFAM:SSF51197	MapMan:11.5.1.2	:	:	:

Description

No Description!

Coordinates

chr6B:-:624177134..624179015

Molecular Weight (calculated)

38312.5 Da

IEP (calculated)

4.715

GRAVY (calculated)

-0.202

Length

345 amino acids

Sequence
(BLAST)

001: MAIPANAAAS LSFPVINMEK LETEERGAAM GVIGDACENW GFFEVPLPPT HIEFSCSRVI YEPAGISHEL MDEVERVSKA HYAACWEQQF KEFAARTLEA
101: GEKGADVKDV DWESTFFVRH LPSSNLADLP NLDHHYRQVM KEFASEIEKL AEKVLDLLCE NLGLELGYLK RAFAGSRGPT FGTKVSSYPP CPRPDLVDGL
201: RAHTDAGGVI LLFQDDQVSG LQLLKDGAWV DVSPMRHAIV VNIGDQLEVI TNGRYKSVMH RVLTRPDGNR MSLASFYNPG ADAVIFPAPA LVEELSEEEA
301: ERAGSAVYPR FVFEDYMNLY LRHKFESKEP RFEAMKADAA PIATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.