Factsheet for HORVU6Hr1G079600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G305200.1	Wheat	cytosol	86.59	93.66
TraesCS6B01G356000.1	Wheat	cytosol	86.03	93.62
TraesCS6B01G355900.1	Wheat	cytosol	86.03	93.05
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	86.03	92.77
TraesCS6D01G305400.1	Wheat	cytosol	85.75	92.75
TraesCS6B01G356200.1	Wheat	cytosol	85.75	92.75
TraesCS6A01G325700.1	Wheat	cytosol	85.47	92.45
TraesCS6B01G355700.1	Wheat	cytosol	84.36	91.52
TraesCS6A01G325500.1	Wheat	cytosol	73.18	90.03
TraesCS6A01G325400.1	Wheat	cytosol	82.4	89.67
TraesCS6A01G325600.1	Wheat	cytosol	82.4	89.67
Os02t0771600-01	Rice	cytosol	77.09	85.98
EES05870	Sorghum	cytosol	76.54	85.89
TraesCS6B01G355800.1	Wheat	extracellular	82.12	85.22
Zm00001d018211_P001	Maize	extracellular	73.46	82.97
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	81.01	81.92
Zm00001d052136_P001	Maize	cytosol	71.51	79.26
GSMUA_Achr7P18420_001	Banana	cytosol	63.13	71.07
GSMUA_AchrUn_...	Banana	cytosol	20.95	69.44
GSMUA_Achr1P18250_001	Banana	cytosol	60.34	68.57
HORVU5Hr1G067490.2	Barley	cytosol	54.75	67.12
HORVU1Hr1G020450.1	Barley	cytosol	43.85	50.97
HORVU1Hr1G020410.2	Barley	cytosol	44.13	50.97
HORVU7Hr1G086650.1	Barley	cytosol	38.83	47.44
HORVU4Hr1G017660.1	Barley	cytosol	41.62	47.15
HORVU7Hr1G116830.1	Barley	cytosol	36.59	41.2
HORVU1Hr1G020430.1	Barley	peroxisome	33.24	38.39

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	UniProt:A0A287UVC3	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:HORVU6Hr1G079600	EnsemblPlants:HORVU6Hr1G079600.2	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF179	SUPFAM:SSF51197
UniParc:UPI000B462CF9	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:538118483..538120239

Molecular Weight (calculated)

39699.1 Da

IEP (calculated)

5.153

GRAVY (calculated)

-0.248

Length

358 amino acids

Sequence
(BLAST)

001: RTLTLCFSLQ LTSSPAQHTH IQISRAMAIP ANAAAASLSF PVINMENLET EERGAAMEVI RDACENWGFF ELLNHGISHE LMDEVERVSK AHYAACREEQ
101: FKEFAARTLE AGEQGADVKD VDWESTFFVR HLPASNLADL PDLDHHYRYQ MKQFASEIEK LAEKVLDLLC QNLGLEQGYL KRAFDGSKGP TFGTKVSSYP
201: PCPRPDLVDG LRAHTDAGGV ILLFQDDQVS GLQLLKDGAW VDVPPMRHAV VVNIGDQLEV ITNGRYKSVM HRVLTRPDGN RMSIASFYNP GADAVIFPAP
301: ALVAAAGAAE RNEGEEGTAV YPRFVFEDYM DLYLRHKFEA KEPRFKAMKA DAAPIATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.