Factsheet for HORVU4Hr1G017660.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G221300.1	Wheat	cytosol	97.15	98.08
TraesCSU01G067700.1	Wheat	cytosol	97.78	97.78
TraesCS4D01G095500.1	Wheat	cytosol	96.52	96.52
Os11t0186900-01	Rice	cytosol	81.33	83.17
Zm00001d004719_P001	Maize	cytosol	77.53	79.03
Zm00001d004718_P001	Maize	cytosol	77.53	79.03
EES09442	Sorghum	cytosol	78.8	78.55
Zm00001d000163_P001	Maize	extracellular	77.53	78.27
EES08130	Sorghum	cytosol	77.53	77.53
CDX88360	Canola	cytosol	19.3	64.21
VIT_18s0001g01840.t01	Wine grape	cytosol	58.86	63.7
KRH64615	Soybean	cytosol	62.03	63.64
HORVU1Hr1G020410.2	Barley	cytosol	62.34	63.55
GSMUA_Achr10P...	Banana	cytosol	66.77	63.36
HORVU1Hr1G020450.1	Barley	cytosol	61.71	63.31
KRH53298	Soybean	nucleus	61.39	63.19
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	61.08	62.87
CDY38352	Canola	cytosol	60.76	62.34
PGSC0003DMT400030740	Potato	cytosol	61.71	62.3
CDX88361	Canola	cytosol	15.82	61.73
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	55.38	61.62
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	59.81	61.56
Bra008302.1-P	Field mustard	cytosol	55.06	61.27
CDY72562	Canola	cytosol	45.25	61.11
Solyc06g060070.2.1	Tomato	cytosol	60.44	60.83
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	60.76	60.76
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	60.13	59.56
Bra003687.1-P	Field mustard	cytosol	56.01	58.03
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	56.65	57.93
HORVU1Hr1G020430.1	Barley	peroxisome	49.05	50.0
HORVU5Hr1G067490.2	Barley	cytosol	43.35	46.92
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	47.47	45.18
HORVU7Hr1G086650.1	Barley	cytosol	41.46	44.71
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	47.15	41.62
HORVU7Hr1G116830.1	Barley	cytosol	38.61	38.36

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:HORVU4Hr1G017660	EnsemblPlants:HORVU4Hr1G017660.1	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0VND8
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189
SUPFAM:SSF51197	UniParc:UPI0002955423	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:79377754..79379819

Molecular Weight (calculated)

35012.6 Da

IEP (calculated)

4.606

GRAVY (calculated)

-0.330

Length

316 amino acids

Sequence
(BLAST)

001: MAIPVIDFSR LDGDERAAAL AEIAAGFEEW GFFQLVNTGI PDELLERVKK VCNDCYKLRE EGFNGSNPAV KALAALVEQE GEGLAPRKVQ GMDWEDVFTL
101: HDNLPWPSIP PTFKETMMEY RTELKKLAEK MLGVMEELLG LEEGQITKVF SKDGDFEPFY GTKVSHYPPC PRPEMVDGLR AHTDAGGLIL LFQDDRVGGL
201: QVLGRDGRWA DVQPVENAIV INTGDQIEVM SNGRYKSAWH RVLATRDGNR RSIASFYNPA RAATIAPAIP AAADSGPGGD YPSFSFGDYM EVYIKQKFQD
301: KEPRFAAAAA IKNMVD

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.