CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09442	Sorghum	cytosol	96.52	96.21
Zm00001d000163_P001	Maize	extracellular	90.51	91.37
Zm00001d004719_P001	Maize	cytosol	88.61	90.32
Zm00001d004718_P001	Maize	cytosol	88.61	90.32
Os11t0186900-01	Rice	cytosol	79.11	80.91
TraesCS4A01G221300.1	Wheat	cytosol	77.85	78.59
TraesCSU01G067700.1	Wheat	cytosol	77.85	77.85
HORVU4Hr1G017660.1	Barley	cytosol	77.53	77.53
TraesCS4D01G095500.1	Wheat	cytosol	77.22	77.22
EES17716	Sorghum	cytosol	63.61	63.61
EES19027	Sorghum	cytosol	63.61	63.61
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	61.71	63.52
KRH53298	Soybean	nucleus	61.39	63.19
CDX88360	Canola	cytosol	18.99	63.16
VIT_18s0001g01840.t01	Wine grape	cytosol	58.23	63.01
KRH64615	Soybean	cytosol	61.39	62.99
CDX88361	Canola	cytosol	16.14	62.96
CDY72562	Canola	cytosol	46.52	62.82
CDY38352	Canola	cytosol	61.08	62.66
GSMUA_Achr10P...	Banana	cytosol	65.82	62.46
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	55.7	61.97
Bra008302.1-P	Field mustard	cytosol	55.7	61.97
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	60.13	61.89
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	60.76	60.76
PGSC0003DMT400030740	Potato	cytosol	59.18	59.74
Bra003687.1-P	Field mustard	cytosol	56.96	59.02
Solyc06g060070.2.1	Tomato	cytosol	57.59	57.96
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	56.65	57.93
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	57.28	56.74
EES05870	Sorghum	cytosol	45.57	45.14
EER98995	Sorghum	cytosol	46.84	44.98
OQU76609	Sorghum	cytosol	37.34	40.27
OQU87044	Sorghum	cytosol	37.66	37.07

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:8072801	UniProt:C5Y6L4	ncoils:Coil	InterPro:DIOX_N
EnsemblPlants:EES08130	ProteinID:EES08130	ProteinID:EES08130.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189	EnsemblPlantsGene:SORBI_3005G067300
SUPFAM:SSF51197	unigene:Sbi.8962	UniParc:UPI0001A861D6	RefSeq:XP_002449142.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:7656795..7658719

Molecular Weight (calculated)

35073.7 Da

IEP (calculated)

4.714

GRAVY (calculated)

-0.311

Length

316 amino acids

Sequence
(BLAST)

001: MAIPVIDFSK LDGPGRAETM AAIAAGFEHV GFFQLVNTGI PDELLERVKK VCSDCYKLRD EAFKDSNPTV KALAELIDKE SEDGLPARKI VDMDWEDVFT
101: LHDDLPWPSN PPAFKETMME YRKELKKLAE KMLGVMEELL GMEEGHIRKA FTNDGEFEPF YGTKVSHYPP CPRPDLVDGL RAHTDAGGLI LLFQDDRFGG
201: LQVQLPDGAW VDVQPLGNAI VINTGDQIEV LSNGRYKSAW HRILATRDGN RRSIASFYNP ARLASMAPAI PAADAGDDDY PSFVFGDYME VYFKQKFEAK
301: APRFAAMAAA GATTTK

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.