CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08130	Sorghum	cytosol	96.21	96.52
Zm00001d000163_P001	Maize	extracellular	92.11	93.29
Zm00001d004719_P001	Maize	cytosol	90.85	92.9
Zm00001d004718_P001	Maize	cytosol	90.85	92.9
Os11t0186900-01	Rice	cytosol	80.13	82.2
TraesCS4A01G221300.1	Wheat	cytosol	78.55	79.55
HORVU4Hr1G017660.1	Barley	cytosol	78.55	78.8
TraesCSU01G067700.1	Wheat	cytosol	78.23	78.48
TraesCS4D01G095500.1	Wheat	cytosol	78.23	78.48
EES17716	Sorghum	cytosol	64.98	65.19
EES19027	Sorghum	cytosol	64.98	65.19
CDX88360	Canola	cytosol	19.24	64.21
CDX88361	Canola	cytosol	16.4	64.2
KRH53298	Soybean	nucleus	62.15	64.17
VIT_18s0001g01840.t01	Wine grape	cytosol	58.99	64.04
KRH64615	Soybean	cytosol	62.15	63.96
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	61.83	63.84
GSMUA_Achr10P...	Banana	cytosol	66.88	63.66
CDY38352	Canola	cytosol	61.2	62.99
CDY72562	Canola	cytosol	46.37	62.82
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	56.15	62.68
Bra008302.1-P	Field mustard	cytosol	56.15	62.68
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	60.25	62.22
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	60.88	61.08
PGSC0003DMT400030740	Potato	cytosol	59.94	60.7
Bra003687.1-P	Field mustard	cytosol	57.1	59.34
Solyc06g060070.2.1	Tomato	cytosol	58.36	58.92
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	56.78	58.25
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	58.36	57.99
EES05870	Sorghum	cytosol	46.37	46.08
EER98995	Sorghum	cytosol	47.63	45.9
OQU76609	Sorghum	cytosol	38.17	41.3
OQU87044	Sorghum	cytosol	37.85	37.38

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:8079762	UniProt:C5Y6L6	ncoils:Coil	InterPro:DIOX_N
EnsemblPlants:EES09442	ProteinID:EES09442	ProteinID:EES09442.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189	EnsemblPlantsGene:SORBI_3005G067500
SUPFAM:SSF51197	unigene:Sbi.21340	UniParc:UPI0001A86795	RefSeq:XP_002450454.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:7698104..7700166

Molecular Weight (calculated)

35132.8 Da

IEP (calculated)

4.839

GRAVY (calculated)

-0.302

Length

317 amino acids

Sequence
(BLAST)

001: MAIPVIDFSK LDGPGRAETM AAIAAGFEHV GFFQLVNTGI PDELLERVKK VCSDCYKLRD EAFKDSNPTV KALAELIDKE SEDGLPARKI VDMDWEDVFT
101: LHDDLPWPSN PPAFKETMME YRKELKKLAE KMLGVMEELL GLEEGHIRKA FTNDGEFEPF YGTKVSHYPP CPRPDLVDGL RAHTDAGGLI LLFQDDRFGG
201: LQAQLPDGTW VDVQPLENAI VINTGDQIEV LSNGRYKSAW HRILATRDGN RRSIASFYNP ARLATIAPAI PAADAGGDNY PSFVFGDYME VYVKQKFQAK
301: APRFAAMAAA AATTTTK

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.