Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 91.58 | 30.63 |
| AT1G77330.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 92.63 | 28.66 |
| CDY38352 | Canola | cytosol | 91.58 | 28.25 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 90.53 | 28.01 |
| Bra015675.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 90.53 | 27.83 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 91.58 | 27.53 |
| KRH53298 | Soybean | nucleus | 72.63 | 22.48 |
| KRH64615 | Soybean | cytosol | 72.63 | 22.4 |
| VIT_18s0001g01840.t01 | Wine grape | cytosol | 66.32 | 21.58 |
| GSMUA_Achr6P12910_001 | Banana | cytosol | 69.47 | 21.43 |
| PGSC0003DMT400015435 | Potato | cytoskeleton, cytosol, peroxisome | 69.47 | 20.69 |
| Zm00001d024852_P001 | Maize | cytosol | 68.42 | 20.63 |
| PGSC0003DMT400030740 | Potato | cytosol | 67.37 | 20.45 |
| Solyc06g060070.2.1 | Tomato | cytosol | 67.37 | 20.38 |
| Zm00001d024850_P001 | Maize | cytosol | 67.37 | 20.32 |
| Zm00001d024851_P001 | Maize | cytosol | 67.37 | 20.32 |
| HORVU1Hr1G020450.1 | Barley | cytosol | 65.26 | 20.13 |
| TraesCS1A01G089500.1 | Wheat | cytosol | 65.26 | 20.13 |
| TraesCS1A01G089600.1 | Wheat | cytosol | 65.26 | 20.13 |
| TraesCS1B01G117400.1 | Wheat | cytosol | 65.26 | 20.13 |
| TraesCS1B01G117500.1 | Wheat | cytosol | 65.26 | 20.13 |
| TraesCS1D01G098000.1 | Wheat | cytosol | 65.26 | 20.13 |
| GSMUA_Achr10P... | Banana | cytosol | 70.53 | 20.12 |
| TraesCS1D01G098100.1 | Wheat | cytosol | 64.21 | 19.81 |
| HORVU1Hr1G020410.2 | Barley | cytosol | 64.21 | 19.68 |
| EES17716 | Sorghum | cytosol | 65.26 | 19.62 |
| EES19027 | Sorghum | cytosol | 65.26 | 19.62 |
| TraesCS4A01G221300.1 | Wheat | cytosol | 64.21 | 19.49 |
| Zm00001d000163_P001 | Maize | extracellular | 64.21 | 19.49 |
| Os05t0149400-01 | Rice | plasma membrane | 63.16 | 19.48 |
| Zm00001d024843_P001 | Maize | cytosol | 64.21 | 19.43 |
| TraesCS4D01G095500.1 | Wheat | cytosol | 64.21 | 19.3 |
| HORVU4Hr1G017660.1 | Barley | cytosol | 64.21 | 19.3 |
| TraesCSU01G067700.1 | Wheat | cytosol | 64.21 | 19.3 |
| EES09442 | Sorghum | cytosol | 64.21 | 19.24 |
| Os11t0186900-01 | Rice | cytosol | 62.11 | 19.09 |
| EES08130 | Sorghum | cytosol | 63.16 | 18.99 |
| Zm00001d004718_P001 | Maize | cytosol | 61.05 | 18.71 |
| Zm00001d004719_P001 | Maize | cytosol | 61.05 | 18.71 |
| Zm00001d024853_P001 | Maize | plastid | 66.32 | 17.7 |
| CDY19546 | Canola | cytosol | 57.89 | 17.19 |
| CDY12944 | Canola | cytosol | 57.89 | 17.19 |
| CDY34603 | Canola | cytosol | 57.89 | 17.13 |
| CDY66260 | Canola | cytosol | 57.89 | 17.13 |
| CDY32039 | Canola | cytosol | 55.79 | 16.56 |
| CDY08654 | Canola | cytosol | 55.79 | 16.56 |
| CDY18281 | Canola | cytosol | 52.63 | 15.58 |
| CDY53397 | Canola | cytosol | 52.63 | 15.58 |
| CDY70340 | Canola | cytosol | 47.37 | 14.9 |
| CDY21655 | Canola | cytosol | 48.42 | 14.84 |
| CDX81937 | Canola | cytosol | 47.37 | 14.52 |
| CDY58326 | Canola | cytoskeleton, cytosol, peroxisome | 46.32 | 14.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.95 | 13.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.95 | 13.55 |
| CDY72562 | Canola | cytosol | 18.95 | 7.69 |
| Os05t0149300-00 | Rice | cytosol, peroxisome | 14.74 | 7.53 |
| HORVU1Hr1G020430.1 | Barley | peroxisome | 22.11 | 6.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.95 | 6.43 |
| CDX68962 | Canola | cytosol | 2.11 | 1.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 0.0 | 0.0 |
| CDX88361 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX88360 | EnsemblPlantsGene:GSBRNA2T00147882001 | Gene3D:2.60.120.330 | GO:A0A078DGJ8 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF189 | PFAM:PF03171 | ProteinID:CDX88360 |
| ProteinID:CDX88360.1 | SUPFAM:SSF51197 | UniParc:UPI0004EDC673 | MapMan:50.1.13 | : | : |
Description
BnaC06g38040D
Coordinates
chrLK031855:-:563067..563433
Molecular Weight (calculated)
10683.7 Da
IEP (calculated)
9.845
GRAVY (calculated)
-0.501
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MTNAIVINTG DQIEVLSNGR YKSAWHRVLA REEGNRKSIA SFYNPSYKAA IGPAAETEGG SEKKYPKFVF GDYMDVYATQ KFMPKEPRFL AVKSL
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.