Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031798.1-P | Field mustard | cytosol | 98.13 | 98.13 |
| CDY66260 | Canola | cytosol | 98.13 | 98.13 |
| AT1G12010.1 | Thale cress | cytosol | 90.34 | 90.62 |
| CDY32039 | Canola | cytosol | 85.36 | 85.62 |
| CDY12944 | Canola | cytosol | 85.05 | 85.31 |
| CDY19546 | Canola | cytosol | 85.05 | 85.31 |
| CDY08654 | Canola | cytosol | 84.74 | 85.0 |
| KRH51147 | Soybean | cytoskeleton, cytosol, peroxisome | 71.34 | 72.01 |
| KRH02009 | Soybean | cytosol | 70.72 | 71.16 |
| KRH11502 | Soybean | cytosol | 70.41 | 71.07 |
| KRH36520 | Soybean | cytosol | 70.09 | 70.75 |
| Solyc02g081190.2.1 | Tomato | cytosol | 70.41 | 70.62 |
| PGSC0003DMT400043087 | Potato | cytosol | 70.09 | 70.31 |
| Solyc07g049530.2.1 | Tomato | nucleus | 68.85 | 70.16 |
| PGSC0003DMT400055332 | Potato | cytosol | 69.47 | 69.91 |
| Solyc07g049550.2.1 | Tomato | nucleus | 68.54 | 69.62 |
| Solyc12g005940.1.1 | Tomato | cytosol | 68.22 | 69.3 |
| Solyc02g036350.2.1 | Tomato | extracellular | 68.85 | 69.28 |
| PGSC0003DMT400036081 | Potato | cytosol | 67.91 | 68.99 |
| CDY53397 | Canola | cytosol | 68.22 | 68.22 |
| CDY18281 | Canola | cytosol | 68.22 | 68.22 |
| CDX88360 | Canola | cytosol | 17.13 | 57.89 |
| CDX88361 | Canola | cytosol | 12.77 | 50.62 |
| CDY70340 | Canola | cytosol | 46.73 | 49.67 |
| CDX81937 | Canola | cytosol | 47.66 | 49.35 |
| CDY38352 | Canola | cytosol | 47.35 | 49.35 |
| CDY58326 | Canola | cytoskeleton, cytosol, peroxisome | 47.35 | 49.03 |
| CDY21655 | Canola | cytosol | 47.35 | 49.03 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 46.73 | 48.86 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 47.35 | 48.1 |
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 42.37 | 47.89 |
| CDY72562 | Canola | cytosol | 33.96 | 46.58 |
| Zm00001d046848_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 29.28 | 36.15 |
| CDX68962 | Canola | cytosol | 11.21 | 35.29 |
| Zm00001d044978_P001 | Maize | extracellular | 4.36 | 11.38 |
Protein Annotations
| MapMan:11.5.1.2 | Gene3D:2.60.120.330 | GO:A0A078HCU1 | UniProt:A0A078HCU1 | EnsemblPlants:CDY34603 | ProteinID:CDY34603 |
| ProteinID:CDY34603.1 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00057049001 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF193 | SUPFAM:SSF51197 | UniParc:UPI0004EDF8ED | SEG:seg |
Description
BnaC08g41620DBnaC08g41620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCU1]
Coordinates
chrLK032338:-:12256..13952
Molecular Weight (calculated)
36639.9 Da
IEP (calculated)
4.814
GRAVY (calculated)
-0.461
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKNIKFPVV DLSKLNGEER DQTMALVDDA CQNWGFFELL NHGIPYDLMD NIERMTKEHY KKFMEQKFKE MLRSKNLDTL ETEVENVDWE STFFLHHLPQ
101: TNLYDIPDMS DEYRAAMKDF GKRLENLAEE LLDLLCENLG LEKGYLKKVF SGTKGPTFGT KVSNYPPCPK PEIIKGLRAH TDAGGLILLF QDDKVSGLQL
201: LKDGVWVDVP PLKHSIVINL GDQLEVITNG KYKSIMHRVM TQKEGNRMSI ASFYNPGSDA EISPAPSLVE KDSDEYPSFV FDDYMKLYAG VKFQPKEPRF
301: EAMKNVAATT DLNPVATVET F
101: TNLYDIPDMS DEYRAAMKDF GKRLENLAEE LLDLLCENLG LEKGYLKKVF SGTKGPTFGT KVSNYPPCPK PEIIKGLRAH TDAGGLILLF QDDKVSGLQL
201: LKDGVWVDVP PLKHSIVINL GDQLEVITNG KYKSIMHRVM TQKEGNRMSI ASFYNPGSDA EISPAPSLVE KDSDEYPSFV FDDYMKLYAG VKFQPKEPRF
301: EAMKNVAATT DLNPVATVET F
001: MEMNIKFPVI DLSKLNGEER DQTMALIDDA CQNWGFFELV NHGLPYDLMD NIERMTKEHY KKHMEQKFKE MLRSKGLDTL ETEVEDVDWE STFYLHHLPQ
101: SNLYDIPDMS NEYRLAMKDF GKRLEILAEE LLDLLCENLG LEKGYLKKVF HGTTGPTFAT KLSNYPPCPK PEMIKGLRAH TDAGGLILLF QDDKVSGLQL
201: LKDGDWVDVP PLKHSIVINL GDQLEVITNG KYKSVMHRVM TQKEGNRMSI ASFYNPGSDA EISPATSLVD KDSKYPSFVF DDYMKLYAGL KFQAKEPRFE
301: AMKNAEAAAD LNPVAVVETF
101: SNLYDIPDMS NEYRLAMKDF GKRLEILAEE LLDLLCENLG LEKGYLKKVF HGTTGPTFAT KLSNYPPCPK PEMIKGLRAH TDAGGLILLF QDDKVSGLQL
201: LKDGDWVDVP PLKHSIVINL GDQLEVITNG KYKSVMHRVM TQKEGNRMSI ASFYNPGSDA EISPATSLVD KDSKYPSFVF DDYMKLYAGL KFQAKEPRFE
301: AMKNAEAAAD LNPVAVVETF
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:O65378]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.