Factsheet for PGSC0003DMT400036081

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g005940.1.1	Tomato	cytosol	97.15	97.15
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	79.75	79.25
KRH02009	Soybean	cytosol	79.43	78.68
KRH36520	Soybean	cytosol	78.8	78.3
KRH11502	Soybean	cytosol	78.8	78.3
PGSC0003DMT400055332	Potato	cytosol	77.85	77.12
PGSC0003DMT400043087	Potato	cytosol	77.22	76.25
CDY32039	Canola	cytosol	71.84	70.94
Bra034504.1-P	Field mustard	cytosol	71.84	70.94
CDY08654	Canola	cytosol	71.52	70.62
CDY19546	Canola	cytosol	70.89	70.0
CDY12944	Canola	cytosol	70.89	70.0
Bra027049.1-P	Field mustard	cytosol	70.89	70.0
Bra019734.1-P	Field mustard	cytosol	70.25	69.38
AT1G12010.1	Thale cress	cytosol	70.25	69.38
CDY66260	Canola	cytosol	69.3	68.22
Bra031798.1-P	Field mustard	cytosol	69.3	68.22
AT1G62380.1	Thale cress	cytosol	68.99	68.12
CDY34603	Canola	cytosol	68.99	67.91
PGSC0003DMT400005971	Potato	cytosol	48.42	50.83
PGSC0003DMT400030740	Potato	cytosol	48.73	49.2
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	48.1	47.65
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.7	37.31
Zm00001d044978_P001	Maize	extracellular	5.38	13.82

Protein Annotations

EntrezGene:102592023	MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1B391	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400013894	PGSC:PGSC0003DMG400013894	EnsemblPlants:PGSC0003DMT400036081	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF381	SUPFAM:SSF51197	UniParc:UPI0002969B53	RefSeq:XP_006351971.1	SEG:seg

Description

1-aminocyclopropane-1-carboxylate oxidase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400013894]

Coordinates

chr12:+:6459389..6462517

Molecular Weight (calculated)

36000.3 Da

IEP (calculated)

5.168

GRAVY (calculated)

-0.408

Length

316 amino acids

Sequence
(BLAST)

001: MENFPIINLE KLNGAERAAT MEKINDACEN WGFFELVNHG IPHEVMDTVE KLTKGHYKKC MEQRFKELVA KKGLEGVEVE VTDMDWESTF FLRHLPSSNI
101: SEIPDLDDVY REVMRDFAKR LEKLAEELLD LLCENLGLEK SYLKNTFYGS KGPNFGTKVS NYPPCPKPDL IKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GQWIDVPPMR HSIVVNLGDQ LEVITNGKYK SVMHRVIAQK DGTRMSLASF YNPGNDALIY PAPALVDKET EAHNKQVYPK FVFDDYMTLY ANLKFQAKEP
301: RFEAMKAMES DPIEIA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.