Factsheet for PGSC0003DMT400055332

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g036350.2.1	Tomato	extracellular	97.81	97.81
PGSC0003DMT400043087	Potato	cytosol	86.21	85.94
KRH36520	Soybean	cytosol	80.88	81.13
KRH11502	Soybean	cytosol	80.88	81.13
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	80.56	80.82
KRH02009	Soybean	cytosol	80.25	80.25
PGSC0003DMT400036081	Potato	cytosol	77.12	77.85
Bra034504.1-P	Field mustard	cytosol	71.16	70.94
CDY32039	Canola	cytosol	70.85	70.62
CDY66260	Canola	cytosol	70.22	69.78
Bra031798.1-P	Field mustard	cytosol	70.22	69.78
CDY08654	Canola	cytosol	69.91	69.69
CDY34603	Canola	cytosol	69.91	69.47
CDY19546	Canola	cytosol	69.59	69.38
CDY12944	Canola	cytosol	69.59	69.38
Bra027049.1-P	Field mustard	cytosol	69.59	69.38
AT1G12010.1	Thale cress	cytosol	69.28	69.06
AT1G62380.1	Thale cress	cytosol	68.65	68.44
Bra019734.1-P	Field mustard	cytosol	68.65	68.44
PGSC0003DMT400030740	Potato	cytosol	48.59	49.52
PGSC0003DMT400005971	Potato	cytosol	46.08	48.84
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	47.34	47.34
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.47	36.15
Zm00001d044978_P001	Maize	extracellular	5.02	13.01

Protein Annotations

EntrezGene:102577821	MapMan:11.5.1.2	Gene3D:2.60.120.330	ProteinID:AAK68076	ProteinID:AAK68076.1	EMBL:AF384821
ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	RefSeq:NP_001275208.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400021476
PGSC:PGSC0003DMG400021476	EnsemblPlants:PGSC0003DMT400055332	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF383	UniProt:Q94F65
SUPFAM:SSF51197	UniParc:UPI00000A1E63	SEG:seg	:	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400021476]

Coordinates

chr2:+:17740757..17743016

Molecular Weight (calculated)

36388.9 Da

IEP (calculated)

4.985

GRAVY (calculated)

-0.342

Length

319 amino acids

Sequence
(BLAST)

001: METFPVVNME MLNTEKRAAI LEKIKDACEN WGFFEVIYHG ISHDLMDTVE KFTKEHYKKC MEQRFKEMVA SKGLEAVQTE IDDLDWESTF FLKHLPVSNI
101: SEVPDLEDDY RKIMKEFADK LEKLAEQLLD LLCENLGLEQ GYLKKVFYGS KGPTFGTKVS NYPPCPKPDL IKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GKWIDVPPMR HSIVINLGDQ LEVITNGKYK SVEHRVIAQP DGNRMSLASF YNPGSDAVIY PAPELLEKEE KENTVMYPKF VFEDYMKLYA GLKFQAKEPR
301: FEAMKAVETA VNLGPIATV

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.