Factsheet for PGSC0003DMT400043087

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g081190.2.1	Tomato	cytosol	98.44	98.44
PGSC0003DMT400055332	Potato	cytosol	85.94	86.21
KRH11502	Soybean	cytosol	80.94	81.45
KRH36520	Soybean	cytosol	80.62	81.13
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	79.06	79.56
KRH02009	Soybean	cytosol	79.06	79.31
PGSC0003DMT400036081	Potato	cytosol	76.25	77.22
Bra031798.1-P	Field mustard	cytosol	70.62	70.41
CDY66260	Canola	cytosol	70.62	70.41
CDY34603	Canola	cytosol	70.31	70.09
CDY32039	Canola	cytosol	69.38	69.38
CDY19546	Canola	cytosol	69.38	69.38
CDY12944	Canola	cytosol	69.38	69.38
Bra034504.1-P	Field mustard	cytosol	69.38	69.38
Bra027049.1-P	Field mustard	cytosol	69.38	69.38
CDY08654	Canola	cytosol	69.06	69.06
Bra019734.1-P	Field mustard	cytosol	68.44	68.44
AT1G12010.1	Thale cress	cytosol	68.44	68.44
AT1G62380.1	Thale cress	cytosol	68.12	68.12
PGSC0003DMT400005971	Potato	cytosol	47.81	50.83
PGSC0003DMT400030740	Potato	cytosol	46.88	47.92
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	46.56	46.71
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.69	36.54
Zm00001d044978_P001	Maize	extracellular	4.38	11.38

Protein Annotations

EntrezGene:102584835	MapMan:11.5.1.2	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1BE22	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400016714	PGSC:PGSC0003DMG400016714	EnsemblPlants:PGSC0003DMT400043087	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF383	SUPFAM:SSF51197	UniParc:UPI00029649A4	RefSeq:XP_006348170.1	SEG:seg	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400016714]

Coordinates

chr2:+:36863752..36865469

Molecular Weight (calculated)

36271.6 Da

IEP (calculated)

4.898

GRAVY (calculated)

-0.354

Length

320 amino acids

Sequence
(BLAST)

001: MESNFPVVDM GLLQTEKRPE AMDKIKDACE NWGFFEVVNH GISHELLDTV ENLTKGHYKK CMEQRFKEMV ASKGLEAVQT EIDDLDWEST FFLKHLPVSN
101: VYEVPDLDDE YRKVMKDFAL KLEKLAENLL DLLCENLGLE KGYLKKAFYG SKGSTFGTKV SNYPPCPKPD LIKGLRAHTD AGGIILLFQD DKVSGLQLLK
201: DGSWIDVPPM KHSIVINLGD QLEVITNGTY KSIEHRVIAQ QDGTRMSIAS FYNPGSDAVI FPAPELIEKT EEENKLKYPK FVFEDYMKLY AGLKFQAKEP
301: RFEAMKAVET TVNLGPIETV

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.