Factsheet for PGSC0003DMT400005971

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g026650.2.1	Tomato	cytosol	96.01	96.01
VIT_11s0016g02380.t01	Wine grape	cytosol	73.09	71.9
KRH49052	Soybean	cytosol	70.43	69.28
KRH60136	Soybean	endoplasmic reticulum	70.43	69.06
KRH41426	Soybean	cytosol	69.1	67.75
CDY70340	Canola	cytosol	66.45	66.23
AT2G19590.1	Thale cress	cytosol	67.11	65.16
Bra031090.1-P	Field mustard	cytosol	64.78	64.57
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	66.45	64.52
CDX81937	Canola	cytosol	65.78	63.87
CDY21655	Canola	cytosol	65.45	63.55
GSMUA_Achr6P00870_001	Banana	cytosol	57.81	59.39
OQU76609	Sorghum	cytosol	56.48	58.02
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	55.48	57.0
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	55.15	56.66
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	54.82	56.31
Zm00001d036955_P001	Maize	cytosol	54.15	55.63
HORVU7Hr1G086650.1	Barley	cytosol	54.15	55.63
Zm00001d005927_P001	Maize	cytosol	41.53	55.31
Zm00001d015860_P001	Maize	cytosol	42.52	54.7
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	37.87	52.78
Zm00001d011208_P001	Maize	cytosol	52.16	49.53
CDX68962	Canola	cytosol	16.61	49.02
PGSC0003DMT400036081	Potato	cytosol	50.83	48.42
GSMUA_Achr5P09690_001	Banana	cytosol	55.15	48.4
OQU87044	Sorghum	cytosol	51.49	48.29
PGSC0003DMT400043087	Potato	cytosol	50.83	47.81
Os01t0580500-01	Rice	cytosol	49.5	47.76
TraesCS7D01G516200.1	Wheat	cytosol	50.17	47.48
TraesCS7B01G444900.1	Wheat	cytosol	49.83	47.17
HORVU7Hr1G116830.1	Barley	cytosol	49.5	46.86
PGSC0003DMT400055332	Potato	cytosol	48.84	46.08
PGSC0003DMT400030740	Potato	cytosol	45.18	43.45
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	44.85	42.32

Protein Annotations

EntrezGene:102577542	MapMan:11.5.1.2	Gene3D:2.60.120.330	ProteinID:AAM29183	ProteinID:AAM29183.1	EMBL:AY098939
ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	UniProt:M0ZQM8	RefSeq:NP_001275149.2	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
EnsemblPlantsGene:PGSC0003DMG400002321	PGSC:PGSC0003DMG400002321	EnsemblPlants:PGSC0003DMT400005971	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF103
SUPFAM:SSF51197	UniParc:UPI0002964555	:	:	:	:

Description

ACC oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400002321]

Coordinates

chr7:+:32977278..32979126

Molecular Weight (calculated)

34316.1 Da

IEP (calculated)

6.054

GRAVY (calculated)

-0.415

Length

301 amino acids

Sequence
(BLAST)

001: MEIPVIDFSK LEGEERSATM SLLHQACEKW GFFMIENHGI DTYLMDNVKQ LVNQHYEANM KKRFYESELP MSLEKKGNIS NTDWESTFFV WHRPTSNIYE
101: IQGLSKELCK AVDDYIDQLI ELAENLSELM CENLGLEKSC IKEAFSGSKG PSVGTKVAIY PQCPRPDLVR GLREHTDAGG IILLLQDEQV PGLEFFKDGH
201: WVNIPPSKNN RLFVNIGDQI EILSNGMYKS IRHRVMAEKD GNRLSIATFY NPAGEAIISP APKLLYPCHL RFQDYLNLYS KTKFAEKGPR FESAKTLANG
301: H

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.