CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011208_P001	Maize	cytosol	87.54	88.64
Os01t0580500-01	Rice	cytosol	73.52	75.64
TraesCS7D01G516200.1	Wheat	cytosol	71.96	72.64
TraesCS7B01G444900.1	Wheat	cytosol	71.96	72.64
HORVU7Hr1G116830.1	Barley	cytosol	71.34	72.01
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	50.78	52.58
OQU76609	Sorghum	cytosol	47.98	52.56
CDY70340	Canola	cytosol	49.22	52.32
VIT_11s0016g02380.t01	Wine grape	cytosol	49.53	51.96
GSMUA_Achr5P09690_001	Banana	cytosol	55.45	51.9
CDX81937	Canola	cytosol	49.84	51.61
PGSC0003DMT400005971	Potato	cytosol	48.29	51.49
Bra031090.1-P	Field mustard	cytosol	47.98	50.99
Solyc07g026650.2.1	Tomato	cytosol	47.66	50.83
KRH60136	Soybean	endoplasmic reticulum	48.6	50.81
CDY21655	Canola	cytosol	48.91	50.65
AT2G19590.1	Thale cress	cytosol	48.6	50.32
KRH49052	Soybean	cytosol	47.66	50.0
KRH41426	Soybean	cytosol	47.66	49.84
EES17716	Sorghum	cytosol	42.99	43.67
EES19027	Sorghum	cytosol	42.68	43.35
CDX68962	Canola	cytosol	13.4	42.16
EES05870	Sorghum	cytosol	41.43	41.69
EER98995	Sorghum	cytosol	41.74	40.73
EES09442	Sorghum	cytosol	37.38	37.85
EES08130	Sorghum	cytosol	37.07	37.66

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	UniProt:A0A1W0VY40	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:OQU87044	ProteinID:OQU87044	ProteinID:OQU87044.1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF229
EnsemblPlantsGene:SORBI_3003G197200	SUPFAM:SSF51197	UniParc:UPI0001FCC8DA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:52245550..52247003

Molecular Weight (calculated)

35019.2 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.240

Length

321 amino acids

Sequence
(BLAST)

001: MTGPMEIPVI DLSGLNGGDE QRSRTLAELH DACKDWGFFW VENHGVDAAL MDDVKRFVYG HYEEHLEAKF YASDLAKNLD TATDDGEAEV EPPSDKVDWE
101: STYFIQHHPK TNVADFPEIT PACRETLDAY IAQMVSLAER LGECVSLNLG LPPGHVAGTF APPFVGTKFA MYPSCPRPEL VWGLRAHTDA GGIILLLQDD
201: VVGGLEFLKG GTHWVPVGPT KGGRLFVNIG DQIEVLSGGA YRSIVHRVAA GDQGRRLSVA TFYNPGPDAV VAPAASIRRE DADAAAAYPG PYRFGDYLEY
301: YQGTKFGDKD ARFQAVKKLL G

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.