CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	91.18	30.0
CDY70340	Canola	cytosol	86.27	29.14
CDY21655	Canola	cytosol	83.33	27.42
AT2G19590.1	Thale cress	cytosol	82.35	27.1
CDX81937	Canola	cytosol	81.37	26.77
KRH49052	Soybean	cytosol	61.76	20.59
KRH60136	Soybean	endoplasmic reticulum	59.8	19.87
KRH41426	Soybean	cytosol	59.8	19.87
VIT_11s0016g02380.t01	Wine grape	cytosol	57.84	19.28
PGSC0003DMT400005971	Potato	cytosol	49.02	16.61
Solyc07g026650.2.1	Tomato	cytosol	48.04	16.28
CDX88361	Canola	cytosol	12.75	16.05
CDY72562	Canola	cytosol	32.35	14.1
Zm00001d011208_P001	Maize	cytosol	43.14	13.88
Zm00001d036955_P001	Maize	cytosol	39.22	13.65
GSMUA_Achr6P00870_001	Banana	cytosol	39.22	13.65
OQU87044	Sorghum	cytosol	42.16	13.4
OQU76609	Sorghum	cytosol	38.24	13.31
Zm00001d015860_P001	Maize	cytosol	30.39	13.25
HORVU7Hr1G086650.1	Barley	cytosol	37.25	12.97
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	37.25	12.97
Zm00001d005927_P001	Maize	cytosol	28.43	12.83
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	36.27	12.63
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	35.29	12.29
TraesCS7B01G444900.1	Wheat	cytosol	38.24	12.26
CDY32039	Canola	cytosol	38.24	12.19
CDY19546	Canola	cytosol	38.24	12.19
CDY12944	Canola	cytosol	38.24	12.19
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	33.33	11.97
GSMUA_Achr5P09690_001	Banana	cytosol	40.2	11.95
HORVU7Hr1G116830.1	Barley	cytosol	37.25	11.95
CDY08654	Canola	cytosol	37.25	11.88
TraesCS7D01G516200.1	Wheat	cytosol	36.27	11.64
Os01t0580500-01	Rice	cytosol	35.29	11.54
CDY18281	Canola	cytosol	36.27	11.53
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	34.31	11.4
CDY38352	Canola	cytosol	34.31	11.36
CDY66260	Canola	cytosol	35.29	11.21
CDY34603	Canola	cytosol	35.29	11.21
CDY53397	Canola	cytosol	35.29	11.21
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	33.33	10.76
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	16.67	7.87
CDX88360	Canola	cytosol	1.96	2.11

Protein Annotations

EnsemblPlants:CDX68962	EnsemblPlantsGene:GSBRNA2T00130708001	Gene3D:2.60.120.330	InterPro:IPNS-like	InterPro:IPR027443	PANTHER:PTHR10209
PANTHER:PTHR10209:SF103	ProteinID:CDX68962	ProteinID:CDX68962.1	SUPFAM:SSF51197	UniParc:UPI0004EE6FE5	MapMan:50.1.13

Description

BnaC01g04910D

Coordinates

chrLK031789:-:2224416..2224848

Molecular Weight (calculated)

11982.4 Da

IEP (calculated)

7.772

GRAVY (calculated)

-0.678

Length

102 amino acids

Sequence
(BLAST)

001: MEKVKKLINS HYEEHLKEKF HQSEMVKALS EGKTSDADWE STFFIWHKPT SNISKVPNIS DELIKTMDEY VSQLHKFAER LSKLMCENIG LPQGHIMRRS
101: SF

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.