CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036955_P001	Maize	cytosol	89.76	89.76
Zm00001d015860_P001	Maize	cytosol	70.99	88.89
Zm00001d005927_P001	Maize	cytosol	66.55	86.28
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	84.3	84.3
HORVU7Hr1G086650.1	Barley	cytosol	83.96	83.96
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	83.62	83.62
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	82.94	82.94
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	55.29	75.0
GSMUA_Achr6P00870_001	Banana	cytosol	63.82	63.82
VIT_11s0016g02380.t01	Wine grape	cytosol	61.77	59.15
PGSC0003DMT400005971	Potato	cytosol	58.02	56.48
Solyc07g026650.2.1	Tomato	cytosol	57.68	56.15
CDY70340	Canola	cytosol	57.68	55.96
AT2G19590.1	Thale cress	cytosol	58.7	55.48
Bra031090.1-P	Field mustard	cytosol	57.0	55.3
CDX81937	Canola	cytosol	58.02	54.84
KRH49052	Soybean	cytosol	56.66	54.25
CDY21655	Canola	cytosol	57.34	54.19
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	57.34	54.19
KRH41426	Soybean	cytosol	56.66	54.07
KRH60136	Soybean	endoplasmic reticulum	56.66	54.07
OQU87044	Sorghum	cytosol	52.56	47.98
EES05870	Sorghum	cytosol	46.42	42.63
EES19027	Sorghum	cytosol	44.71	41.46
EES17716	Sorghum	cytosol	44.71	41.46
EER98995	Sorghum	cytosol	46.42	41.34
CDX68962	Canola	cytosol	13.31	38.24
EES09442	Sorghum	cytosol	41.3	38.17
EES08130	Sorghum	cytosol	40.27	37.34

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:8079305	UniProt:A0A1W0VTJ5	InterPro:DIOX_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:OQU76609	ProteinID:OQU76609
ProteinID:OQU76609.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF103	EnsemblPlantsGene:SORBI_3010G174000	SUPFAM:SSF51197	UniParc:UPI0001A898BC	RefSeq:XP_002438605.1	:

Description

hypothetical protein

Coordinates

chr10:-:50939724..50941078

Molecular Weight (calculated)

33676.3 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.418

Length

293 amino acids

Sequence
(BLAST)

001: MEIPVIKMDQ LHGEKRSETL SLLHNACAQW GFFWLENHGV NEDLMNKMKD LVNKHYEQDM EKNFYSSEKA KILDYEKASS NVDWECSFMY RHQPKSNSHD
101: IPELLRATVF EYAEEVIKLA EQLAAVMSEN LGLDKDYIEQ AFSKPSVGIK VAKYPRCSHP ELVMGLREHT DAGGIILLFQ DELVPGLEFL KDGKWIAIPP
201: TEGNRIFVNL GDQIEVMTNG IYKSICHRVL PNKNGSRLSI ATFYNPGADA IIYPAPKLTY PSQYRFQDYL NFYSTTKFTD KVSRFQTTKA ILK

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.