Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21655 | Canola | cytosol | 97.74 | 97.74 |
| AT2G19590.1 | Thale cress | cytosol | 89.68 | 89.68 |
| CDY58326 | Canola | cytoskeleton, cytosol, peroxisome | 89.03 | 89.03 |
| CDY70340 | Canola | cytosol | 86.13 | 88.41 |
| CDX68962 | Canola | cytosol | 26.77 | 81.37 |
| VIT_11s0016g02380.t01 | Wine grape | cytosol | 69.03 | 69.93 |
| KRH49052 | Soybean | cytosol | 68.06 | 68.95 |
| KRH60136 | Soybean | endoplasmic reticulum | 68.06 | 68.73 |
| KRH41426 | Soybean | cytosol | 67.42 | 68.08 |
| PGSC0003DMT400005971 | Potato | cytosol | 63.87 | 65.78 |
| Solyc07g026650.2.1 | Tomato | cytosol | 63.23 | 65.12 |
| GSMUA_Achr6P00870_001 | Banana | cytosol | 55.16 | 58.36 |
| OQU76609 | Sorghum | cytosol | 54.84 | 58.02 |
| Zm00001d005927_P001 | Maize | cytosol | 41.29 | 56.64 |
| Os06t0573900-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 39.03 | 56.02 |
| Zm00001d036955_P001 | Maize | cytosol | 52.58 | 55.63 |
| TraesCS7B01G264000.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.58 | 55.63 |
| TraesCS7A01G363900.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.58 | 55.63 |
| Zm00001d015860_P001 | Maize | cytosol | 41.94 | 55.56 |
| TraesCS7D01G359300.1 | Wheat | cytoskeleton, cytosol, peroxisome | 51.94 | 54.95 |
| HORVU7Hr1G086650.1 | Barley | cytosol | 51.94 | 54.95 |
| CDX88361 | Canola | cytosol | 13.55 | 51.85 |
| Zm00001d011208_P001 | Maize | cytosol | 51.94 | 50.79 |
| OQU87044 | Sorghum | cytosol | 51.61 | 49.84 |
| TraesCS7B01G444900.1 | Wheat | cytosol | 50.0 | 48.74 |
| Os01t0580500-01 | Rice | cytosol | 49.03 | 48.72 |
| TraesCS7D01G516200.1 | Wheat | cytosol | 49.68 | 48.43 |
| GSMUA_Achr5P09690_001 | Banana | cytosol | 53.23 | 48.1 |
| HORVU7Hr1G116830.1 | Barley | cytosol | 49.03 | 47.8 |
| CDY34603 | Canola | cytosol | 49.35 | 47.66 |
| CDY12944 | Canola | cytosol | 49.03 | 47.5 |
| CDY19546 | Canola | cytosol | 49.03 | 47.5 |
| CDX88360 | Canola | cytosol | 14.52 | 47.37 |
| CDY66260 | Canola | cytosol | 49.03 | 47.35 |
| CDY32039 | Canola | cytosol | 48.06 | 46.56 |
| CDY08654 | Canola | cytosol | 47.74 | 46.25 |
| CDY18281 | Canola | cytosol | 47.74 | 46.11 |
| CDY53397 | Canola | cytosol | 47.42 | 45.79 |
| CDY38352 | Canola | cytosol | 45.16 | 45.45 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 44.52 | 44.95 |
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 40.97 | 44.72 |
| CDY72562 | Canola | cytosol | 33.55 | 44.44 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 44.84 | 43.99 |
Protein Annotations
| MapMan:11.5.1.2 | Gene3D:2.60.120.330 | GO:A0A078CYN5 | EnsemblPlants:CDX81937 | ProteinID:CDX81937 | ProteinID:CDX81937.1 |
| ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00136900001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF103 |
| SUPFAM:SSF51197 | UniParc:UPI0004EDF6E7 | : | : | : | : |
Description
BnaC08g36640D
Coordinates
chrLK031826:-:1564314..1565616
Molecular Weight (calculated)
35265.2 Da
IEP (calculated)
5.637
GRAVY (calculated)
-0.474
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLIKEREME IPVIDFSELD GENRIKTMSL LDHACDKWGF FMVDNHGVDK ELMEKVKKMI NSHYEDHLKE KFYQSEMAKA LSEGKTSDAD WESSFFIWHK
101: PTSNICRIPN ISDELIKTMD EYVSQLHKLA ERLSNLMCEN LGLSQEYITN AFSGPEGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFLKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSAVH RVMTLKDGCR LSLATFYNPA GDAVISPAPE LLYPSGYQFQ DYLKLYSTTK FGDKGSRFHT
301: MKKMENGDSV
101: PTSNICRIPN ISDELIKTMD EYVSQLHKLA ERLSNLMCEN LGLSQEYITN AFSGPEGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFLKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSAVH RVMTLKDGCR LSLATFYNPA GDAVISPAPE LLYPSGYQFQ DYLKLYSTTK FGDKGSRFHT
301: MKKMENGDSV
001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA
Arabidopsis Description
ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.