CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031798.1-P	Field mustard	cytosol	100.0	100.0
CDY34603	Canola	cytosol	98.13	98.13
AT1G12010.1	Thale cress	cytosol	90.97	91.25
CDY32039	Canola	cytosol	85.98	86.25
CDY19546	Canola	cytosol	85.67	85.94
CDY12944	Canola	cytosol	85.67	85.94
CDY08654	Canola	cytosol	85.36	85.62
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	71.65	72.33
KRH02009	Soybean	cytosol	71.03	71.47
KRH11502	Soybean	cytosol	70.72	71.38
KRH36520	Soybean	cytosol	70.41	71.07
Solyc02g081190.2.1	Tomato	cytosol	70.72	70.94
PGSC0003DMT400043087	Potato	cytosol	70.41	70.62
Solyc07g049530.2.1	Tomato	nucleus	69.16	70.48
PGSC0003DMT400055332	Potato	cytosol	69.78	70.22
Solyc07g049550.2.1	Tomato	nucleus	68.85	69.94
Solyc12g005940.1.1	Tomato	cytosol	68.54	69.62
Solyc02g036350.2.1	Tomato	extracellular	69.16	69.59
PGSC0003DMT400036081	Potato	cytosol	68.22	69.3
CDY53397	Canola	cytosol	68.54	68.54
CDY18281	Canola	cytosol	68.54	68.54
CDX88360	Canola	cytosol	17.13	57.89
CDX88361	Canola	cytosol	12.77	50.62
CDY38352	Canola	cytosol	47.66	49.68
CDY70340	Canola	cytosol	46.42	49.34
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	47.04	49.19
CDX81937	Canola	cytosol	47.35	49.03
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	47.04	48.71
CDY21655	Canola	cytosol	47.04	48.71
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	47.66	48.42
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	42.68	48.24
CDY72562	Canola	cytosol	34.27	47.01
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.28	36.15
CDX68962	Canola	cytosol	11.21	35.29
Zm00001d044978_P001	Maize	extracellular	4.36	11.38

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	GO:A0A078JIJ8	UniProt:A0A078JIJ8	EnsemblPlants:CDY66260	ProteinID:CDY66260
ProteinID:CDY66260.1	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00052392001
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF193	SUPFAM:SSF51197	UniParc:UPI000254290C	SEG:seg

Description

BnaAnng21950DBnaAnng21950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIJ8]

Coordinates

chrLK035172:+:17174..18935

Molecular Weight (calculated)

36658.0 Da

IEP (calculated)

4.880

GRAVY (calculated)

-0.450

Length

321 amino acids

Sequence
(BLAST)

001: MEKNIKFPVV DLSKLNGEER DQTMALIDDA CQNWGFFELL NHGIPYDLMD NIERMTKEHY KKFMEQKFKE MLRSKGLDTL ETEVENVDWE STFFLHHLPQ
101: TNLYDIPDMS DEYRAAMKDF GKRLENLAEE LLDLLCENLG LEKGYLKKVF RGTNGPTFGT KVSNYPPCPK PEMIKGLRAH TDAGGLILLF QDDKVSGLQL
201: LKDGVWVDVP PLKHSIVINL GDQLEVITNG KYKSIMHRVM TQKEGNRMSI ASFYNPGSDA EISPAPSLVE KCSDEYPSFV FDDYMKLYAG VKFQPKEPRF
301: EAMKNVAATT DLNPVATVET F

Best Arabidopsis Sequence Match ( AT1G12010.1 )
(BLAST)

001: MEMNIKFPVI DLSKLNGEER DQTMALIDDA CQNWGFFELV NHGLPYDLMD NIERMTKEHY KKHMEQKFKE MLRSKGLDTL ETEVEDVDWE STFYLHHLPQ
101: SNLYDIPDMS NEYRLAMKDF GKRLEILAEE LLDLLCENLG LEKGYLKKVF HGTTGPTFAT KLSNYPPCPK PEMIKGLRAH TDAGGLILLF QDDKVSGLQL
201: LKDGDWVDVP PLKHSIVINL GDQLEVITNG KYKSVMHRVM TQKEGNRMSI ASFYNPGSDA EISPATSLVD KDSKYPSFVF DDYMKLYAGL KFQAKEPRFE
301: AMKNAEAAAD LNPVAVVETF

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:O65378]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.