Factsheet for Solyc02g036350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 22364583

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055332	Potato	cytosol	97.81	97.81
Solyc02g081190.2.1	Tomato	cytosol	86.52	86.25
KRH11502	Soybean	cytosol	81.82	82.08
KRH36520	Soybean	cytosol	81.82	82.08
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	80.56	80.82
Solyc07g049530.2.1	Tomato	nucleus	79.62	80.63
KRH02009	Soybean	cytosol	80.56	80.56
Solyc07g049550.2.1	Tomato	nucleus	78.37	79.11
Solyc12g005940.1.1	Tomato	cytosol	77.43	78.16
Bra034504.1-P	Field mustard	cytosol	70.53	70.31
CDY32039	Canola	cytosol	70.22	70.0
Bra031798.1-P	Field mustard	cytosol	69.59	69.16
CDY66260	Canola	cytosol	69.59	69.16
CDY08654	Canola	cytosol	69.28	69.06
CDY34603	Canola	cytosol	69.28	68.85
CDY19546	Canola	cytosol	68.97	68.75
CDY12944	Canola	cytosol	68.97	68.75
Bra027049.1-P	Field mustard	cytosol	68.97	68.75
AT1G12010.1	Thale cress	cytosol	68.65	68.44
AT1G62380.1	Thale cress	cytosol	68.03	67.81
Bra019734.1-P	Field mustard	cytosol	68.03	67.81
Solyc07g026650.2.1	Tomato	cytosol	46.4	49.17
Solyc06g060070.2.1	Tomato	cytosol	48.28	49.04
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.15	35.77
Zm00001d044978_P001	Maize	extracellular	5.02	13.01

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	UniProt:A4ZYQ6	ncoils:Coil	InterPro:DIOX_N	EMBL:EF501822
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009693	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF383	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc02g036350.2	EnsemblPlants:Solyc02g036350.2.1	UniParc:UPI00015059E1
SEG:seg	:	:	:	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:UniProtKB/TrEMBL;Acc:A4ZYQ6]

Coordinates

chr2:+:30572118..30574305

Molecular Weight (calculated)

36351.8 Da

IEP (calculated)

4.912

GRAVY (calculated)

-0.367

Length

319 amino acids

Sequence
(BLAST)

001: METFPVVNME MLNTEKRAAA LEKIKDACEN WGFFEVINHG ISHELLDTVE KFTKEHYKKC MEQRFKEMVA SKGLEGVQTE IDDLDWESTF FLKHLPVSNI
101: SEVPDLEDDY RKIMKEFADK LEKLAEQLLD LLCENLGLEQ GYLKKVFYGS KGPTFGTKVS NYPPCPKPDL IKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: DKWIDVPPMR HSIVINLGDQ LEVITNGKYK SVEHRVIAQP DGNRMSLASF YNPGSDAVIY PAPELLEKEE KENTIMYPKF VFEDYMKLYA GLKFQAKEPR
301: FEAMKAVETA VNLGPIATV

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.