Factsheet for Solyc07g049550.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g049530.2.1	Tomato	nucleus	94.3	94.6
Solyc12g005940.1.1	Tomato	cytosol	88.29	88.29
KRH11502	Soybean	cytosol	80.06	79.56
KRH36520	Soybean	cytosol	79.75	79.25
KRH02009	Soybean	cytosol	79.75	79.0
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	79.43	78.93
Solyc02g081190.2.1	Tomato	cytosol	79.75	78.75
Solyc02g036350.2.1	Tomato	extracellular	79.11	78.37
CDY32039	Canola	cytosol	71.84	70.94
Bra034504.1-P	Field mustard	cytosol	71.84	70.94
CDY08654	Canola	cytosol	71.52	70.62
CDY19546	Canola	cytosol	70.57	69.69
CDY12944	Canola	cytosol	70.57	69.69
Bra027049.1-P	Field mustard	cytosol	70.57	69.69
AT1G12010.1	Thale cress	cytosol	69.94	69.06
CDY66260	Canola	cytosol	69.94	68.85
Bra031798.1-P	Field mustard	cytosol	69.94	68.85
AT1G62380.1	Thale cress	cytosol	69.62	68.75
CDY34603	Canola	cytosol	69.62	68.54
Bra019734.1-P	Field mustard	cytosol	68.99	68.12
Solyc07g026650.2.1	Tomato	cytosol	46.84	49.17
Solyc06g060070.2.1	Tomato	cytosol	47.78	48.09
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.06	36.54
Zm00001d044978_P001	Maize	extracellular	5.06	13.01

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ProteinID:CAA90904.1	ncoils:Coil	InterPro:DIOX_N	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009693	GO:GO:0009815	GO:GO:0009835	GO:GO:0009987	GO:GO:0016491
GO:GO:0030246	GO:GO:0031418	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	UniProt:P24157	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF381	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc07g049550.2	EnsemblPlants:Solyc07g049550.2.1	UniParc:UPI000012519B
EMBL:X58885	SEG:seg	:	:	:	:

Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:P24157]

Coordinates

chr7:+:59847436..59849308

Molecular Weight (calculated)

35976.2 Da

IEP (calculated)

4.880

GRAVY (calculated)

-0.385

Length

316 amino acids

Sequence
(BLAST)

001: MENFPIINLE NLNGDERAKT MEMIKDACEN WGFFELVNHG IPHEVMDTVE KLTKGHYKKC MEQRFKELVA SKGLEAVQAE VTDLDWESTF FLRHLPTSNI
101: SQVPDLDEEY REVMRDFAKR LEKLAEELLD LLCENLGLEK GYLKNAFYGS KGPNFGTKVS NYPPCPKPDL IKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: EQWIDVPPMR HSIVVNLGDQ LEVITNGKYK SVMHRVIAQT DGTRMSLASF YNPGNDAVIY PAPSLIEESK QVYPKFVFDD YMKLYAGLKF QPKEPRFEAM
301: KAMEANVELV DQIASA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.