Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38352 | Canola | cytosol | 99.35 | 99.03 |
| AT1G77330.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 95.11 | 95.11 |
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 87.3 | 94.37 |
| CDX88361 | Canola | cytosol | 24.43 | 92.59 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 94.79 | 92.09 |
| CDY72562 | Canola | cytosol | 70.03 | 91.88 |
| CDX88360 | Canola | cytosol | 28.01 | 90.53 |
| KRH53298 | Soybean | nucleus | 72.96 | 72.96 |
| VIT_18s0001g01840.t01 | Wine grape | cytosol | 68.73 | 72.26 |
| KRH64615 | Soybean | cytosol | 71.99 | 71.75 |
| PGSC0003DMT400030740 | Potato | cytosol | 70.03 | 68.69 |
| GSMUA_Achr6P12910_001 | Banana | cytosol | 68.4 | 68.18 |
| PGSC0003DMT400015435 | Potato | cytoskeleton, cytosol, peroxisome | 70.68 | 68.03 |
| Solyc06g060070.2.1 | Tomato | cytosol | 69.38 | 67.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.31 | 65.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.0 | 64.1 |
| Zm00001d024852_P001 | Maize | cytosol | 64.82 | 63.17 |
| TraesCS1A01G089500.1 | Wheat | cytosol | 62.87 | 62.66 |
| TraesCS1D01G098000.1 | Wheat | cytosol | 62.87 | 62.66 |
| TraesCS1B01G117400.1 | Wheat | cytosol | 62.87 | 62.66 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.6 | 62.58 |
| HORVU1Hr1G020450.1 | Barley | cytosol | 62.54 | 62.34 |
| Zm00001d024851_P001 | Maize | cytosol | 63.84 | 62.22 |
| Zm00001d024850_P001 | Maize | cytosol | 63.84 | 62.22 |
| TraesCS1A01G089600.1 | Wheat | cytosol | 62.22 | 62.01 |
| TraesCS1B01G117500.1 | Wheat | cytosol | 62.22 | 62.01 |
| TraesCS1D01G098100.1 | Wheat | cytosol | 62.22 | 62.01 |
| Zm00001d024843_P001 | Maize | cytosol | 62.87 | 61.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.94 | 61.29 |
| HORVU1Hr1G020410.2 | Barley | cytosol | 61.89 | 61.29 |
| EES17716 | Sorghum | cytosol | 62.87 | 61.08 |
| Zm00001d004719_P001 | Maize | cytosol | 61.56 | 60.97 |
| Zm00001d004718_P001 | Maize | cytosol | 61.56 | 60.97 |
| Os11t0186900-01 | Rice | cytosol | 61.24 | 60.84 |
| EES19027 | Sorghum | cytosol | 62.22 | 60.44 |
| TraesCS4A01G221300.1 | Wheat | cytosol | 61.56 | 60.38 |
| EES09442 | Sorghum | cytosol | 62.22 | 60.25 |
| EES08130 | Sorghum | cytosol | 61.89 | 60.13 |
| GSMUA_Achr10P... | Banana | cytosol | 65.15 | 60.06 |
| HORVU4Hr1G017660.1 | Barley | cytosol | 61.56 | 59.81 |
| TraesCSU01G067700.1 | Wheat | cytosol | 61.56 | 59.81 |
| TraesCS4D01G095500.1 | Wheat | cytosol | 61.56 | 59.81 |
| Os05t0149400-01 | Rice | plasma membrane | 59.93 | 59.74 |
| Zm00001d000163_P001 | Maize | extracellular | 60.59 | 59.42 |
| Os05t0149300-00 | Rice | cytosol, peroxisome | 33.88 | 55.91 |
| Zm00001d024853_P001 | Maize | plastid | 63.19 | 54.49 |
| HORVU1Hr1G020430.1 | Barley | peroxisome | 49.19 | 48.71 |
| CDY19546 | Canola | cytosol | 49.51 | 47.5 |
| CDY12944 | Canola | cytosol | 49.51 | 47.5 |
| CDY32039 | Canola | cytosol | 49.19 | 47.19 |
| CDY08654 | Canola | cytosol | 49.19 | 47.19 |
| CDY66260 | Canola | cytosol | 49.19 | 47.04 |
| CDY34603 | Canola | cytosol | 48.86 | 46.73 |
| CDY18281 | Canola | cytosol | 47.88 | 45.79 |
| CDY70340 | Canola | cytosol | 44.95 | 45.7 |
| CDY53397 | Canola | cytosol | 47.56 | 45.48 |
| CDY58326 | Canola | cytoskeleton, cytosol, peroxisome | 45.6 | 45.16 |
| CDY21655 | Canola | cytosol | 45.28 | 44.84 |
| CDX81937 | Canola | cytosol | 44.95 | 44.52 |
| CDX68962 | Canola | cytosol | 11.4 | 34.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.31 | 31.13 |
Protein Annotations
| MapMan:11.5.1.2 | Gene3D:2.60.120.330 | GO:A0A078HU47 | UniProt:A0A078HU47 | EnsemblPlants:CDY40884 | ProteinID:CDY40884 |
| ProteinID:CDY40884.1 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00071916001 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF189 | SUPFAM:SSF51197 | UniParc:UPI0004EF373E | : |
Description
BnaCnng09750DBnaCnng09750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU47]
Coordinates
chrLK032483:-:223491..224924
Molecular Weight (calculated)
34942.4 Da
IEP (calculated)
4.782
GRAVY (calculated)
-0.569
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIPVIDFSK INGEEREKTL SEIAKACEEW GFFQLVNHGI PLELLNKVKK LASDCYKTER EEAFKTSTPV KLLNELLEKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNTSG LKETMVEYRE EVRKLASKMM EVMDENLGLP KGYIKKAFNE GMEDGEETAF FGTKVSHYPP CPHPELVNGL RSHTDAGGVV LLFQDDEYDG
201: LQVLKDGEWI DVQPMPNAIV INTGDQIEVL SNGRYKSAWH RVLAREEGNR RSIASFYNPS YKAAIGPAAE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKTL
101: QNEWPSNTSG LKETMVEYRE EVRKLASKMM EVMDENLGLP KGYIKKAFNE GMEDGEETAF FGTKVSHYPP CPHPELVNGL RSHTDAGGVV LLFQDDEYDG
201: LQVLKDGEWI DVQPMPNAIV INTGDQIEVL SNGRYKSAWH RVLAREEGNR RSIASFYNPS YKAAIGPAAE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKTL
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.