Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G020450.1 | Barley | cytosol | 96.13 | 96.75 |
| TraesCS1D01G098100.1 | Wheat | cytosol | 95.16 | 95.78 |
| TraesCS1B01G117500.1 | Wheat | cytosol | 95.16 | 95.78 |
| TraesCS1A01G089600.1 | Wheat | cytosol | 95.16 | 95.78 |
| Os05t0149400-01 | Rice | plasma membrane | 84.52 | 85.06 |
| EES17716 | Sorghum | cytosol | 84.19 | 82.59 |
| EES19027 | Sorghum | cytosol | 83.55 | 81.96 |
| Zm00001d024843_P001 | Maize | cytosol | 82.58 | 81.53 |
| Zm00001d024852_P001 | Maize | cytosol | 82.58 | 81.27 |
| Zm00001d024850_P001 | Maize | cytosol | 82.26 | 80.95 |
| Zm00001d024851_P001 | Maize | cytosol | 82.26 | 80.95 |
| Os05t0149300-00 | Rice | cytosol, peroxisome | 47.74 | 79.57 |
| HORVU1Hr1G020430.1 | Barley | peroxisome | 77.42 | 77.42 |
| Zm00001d024853_P001 | Maize | plastid | 82.26 | 71.63 |
| KRH64615 | Soybean | cytosol | 65.48 | 65.91 |
| KRH53298 | Soybean | nucleus | 64.84 | 65.47 |
| CDX88361 | Canola | cytosol | 17.1 | 65.43 |
| CDX88360 | Canola | cytosol | 19.68 | 64.21 |
| VIT_18s0001g01840.t01 | Wine grape | cytosol | 60.32 | 64.04 |
| PGSC0003DMT400030740 | Potato | cytosol | 63.87 | 63.26 |
| AT1G77330.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 62.58 | 63.19 |
| GSMUA_Achr10P... | Banana | cytosol | 67.42 | 62.76 |
| CDY38352 | Canola | cytosol | 62.26 | 62.66 |
| Solyc06g060070.2.1 | Tomato | cytosol | 63.23 | 62.42 |
| CDY72562 | Canola | cytosol | 47.1 | 62.39 |
| HORVU4Hr1G017660.1 | Barley | cytosol | 63.55 | 62.34 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 61.29 | 61.89 |
| Bra003687.1-P | Field mustard | cytosol | 60.65 | 61.64 |
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 56.45 | 61.62 |
| Bra008302.1-P | Field mustard | cytosol | 56.45 | 61.62 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 61.94 | 60.76 |
| PGSC0003DMT400015435 | Potato | cytoskeleton, cytosol, peroxisome | 60.97 | 59.25 |
| Bra015675.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 58.39 | 58.58 |
| HORVU6Hr1G079640.3 | Barley | cytosol, extracellular, peroxisome | 51.61 | 48.19 |
| HORVU5Hr1G067490.2 | Barley | cytosol | 44.84 | 47.6 |
| HORVU7Hr1G086650.1 | Barley | cytosol | 42.58 | 45.05 |
| HORVU6Hr1G079600.2 | Barley | cytosol, mitochondrion, peroxisome, plastid | 50.97 | 44.13 |
| HORVU7Hr1G116830.1 | Barley | cytosol | 42.58 | 41.51 |
Protein Annotations
| MapMan:11.5.1.2 | Gene3D:2.60.120.330 | UniProt:A0A287EUD0 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 |
| GO:GO:0055114 | EnsemblPlantsGene:HORVU1Hr1G020410 | EnsemblPlants:HORVU1Hr1G020410.2 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF394 |
| SUPFAM:SSF51197 | UniParc:UPI000B4634C4 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:80434153..80435204
Molecular Weight (calculated)
34903.5 Da
IEP (calculated)
5.043
GRAVY (calculated)
-0.418
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVPVIDFSK LDGAERAETM AQIADGCENW GFFQLVNHGI PLELLDRVKK VCSESYRLRE AAFRSSKPVQ TLERLVEAER RGEAVAPVDD MDWEDIFYLH
101: DNNQWPSDPP AFKETMREYR SELKKLAERV MEAMDENLGL DKGRMKAAFT GDGLHAPFFG TKVSHYPPCP RPDLITGLRA HTDAGGVILL FQDDKVGGLE
201: VLKDGQWLDV QPLADAIVLN TGDQVEVLSN GRYRSAWHRV LPMRNGNRRS IASFYNPAFE AAISPAVGEA GAAEYPDYVF GDYMDVYNKQ KFEAKEPRFE
301: AVKAPKCLVR
101: DNNQWPSDPP AFKETMREYR SELKKLAERV MEAMDENLGL DKGRMKAAFT GDGLHAPFFG TKVSHYPPCP RPDLITGLRA HTDAGGVILL FQDDKVGGLE
201: VLKDGQWLDV QPLADAIVLN TGDQVEVLSN GRYRSAWHRV LPMRNGNRRS IASFYNPAFE AAISPAVGEA GAAEYPDYVF GDYMDVYNKQ KFEAKEPRFE
301: AVKAPKCLVR
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.