Factsheet for Bra008302.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	95.07	95.07
CDY38352	Canola	cytosol	99.65	91.88
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	94.37	87.3
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	94.72	85.13
Bra003687.1-P	Field mustard	cytosol	90.14	83.93
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	89.44	82.2
KRH53298	Soybean	nucleus	72.89	67.43
KRH64615	Soybean	cytosol	71.83	66.23
VIT_18s0001g01840.t01	Wine grape	cytosol	67.61	65.75
PGSC0003DMT400030740	Potato	cytosol	69.37	62.94
GSMUA_Achr6P12910_001	Banana	cytosol	67.96	62.66
Solyc06g060070.2.1	Tomato	cytosol	69.01	62.42
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	69.72	62.07
GSMUA_AchrUn_...	Banana	cytosol	33.8	61.94
GSMUA_AchrUn_...	Banana	cytosol	33.1	60.65
GSMUA_AchrUn_...	Banana	cytosol	57.75	60.29
Zm00001d024852_P001	Maize	cytosol	64.44	58.1
GSMUA_AchrUn_...	Banana	cytosol	55.63	57.88
TraesCS1D01G098000.1	Wheat	cytosol	62.32	57.47
TraesCS1B01G117400.1	Wheat	cytosol	62.32	57.47
TraesCS1A01G089500.1	Wheat	cytosol	62.32	57.47
HORVU1Hr1G020450.1	Barley	cytosol	62.32	57.47
Zm00001d024851_P001	Maize	cytosol	63.38	57.14
Zm00001d024850_P001	Maize	cytosol	63.38	57.14
TraesCS1D01G098100.1	Wheat	cytosol	61.62	56.82
TraesCS1B01G117500.1	Wheat	cytosol	61.62	56.82
TraesCS1A01G089600.1	Wheat	cytosol	61.62	56.82
Zm00001d004718_P001	Maize	cytosol	61.97	56.77
Zm00001d004719_P001	Maize	cytosol	61.97	56.77
HORVU1Hr1G020410.2	Barley	cytosol	61.62	56.45
Zm00001d024843_P001	Maize	cytosol	62.32	56.37
EES17716	Sorghum	cytosol	62.68	56.33
Os11t0186900-01	Rice	cytosol	61.27	56.31
EES09442	Sorghum	cytosol	62.68	56.15
EES19027	Sorghum	cytosol	61.97	55.7
EES08130	Sorghum	cytosol	61.97	55.7
TraesCS4A01G221300.1	Wheat	cytosol	61.27	55.59
Zm00001d000163_P001	Maize	extracellular	60.92	55.27
TraesCS4D01G095500.1	Wheat	cytosol	61.27	55.06
TraesCSU01G067700.1	Wheat	cytosol	61.27	55.06
HORVU4Hr1G017660.1	Barley	cytosol	61.27	55.06
GSMUA_Achr10P...	Banana	cytosol	64.44	54.95
Os05t0149400-01	Rice	plasma membrane	59.51	54.87
Zm00001d024853_P001	Maize	plastid	63.03	50.28
Os05t0149300-00	Rice	cytosol, peroxisome	30.99	47.31
HORVU1Hr1G020430.1	Barley	peroxisome	47.54	43.55
Bra027049.1-P	Field mustard	cytosol	47.89	42.5
Bra031798.1-P	Field mustard	cytosol	47.89	42.37
Bra034504.1-P	Field mustard	cytosol	47.54	42.19
Bra031090.1-P	Field mustard	cytosol	44.72	42.05
Bra019734.1-P	Field mustard	cytosol	47.18	41.88
Bra015380.1-P	Field mustard	cytosol	46.13	40.81
GSMUA_AchrUn_...	Banana	cytosol	57.04	28.17

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EnsemblPlantsGene:Bra008302	EnsemblPlants:Bra008302.1	EnsemblPlants:Bra008302.1-P	ncoils:Coil
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4CVQ5	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189	SUPFAM:SSF51197	UniParc:UPI0002546108

Description

AT1G77330 (E=5e-102) | 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative

Coordinates

chrA02:-:14594935..14596148

Molecular Weight (calculated)

32214.3 Da

IEP (calculated)

5.327

GRAVY (calculated)

-0.587

Length

284 amino acids

Sequence
(BLAST)

001: MAIPVIDFSK INGEEREKTL SEIAKACEEW GFFQLVNHGI PLELLNKVKK LASDCYKTER EEAFKTSTPV KLLNELLEKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNTSG LKETMVEYRE EVRKLASKMM EVMDENMGLP KGYIKKAFNE GMEDGEETAF FGTKVSHYPP CPRPELVNGL RAHTDAGGVP MPNAIVINTG
201: DQIEVLSNGR YKSAWHRVLA REEGNRRSIA SFYNPSYKAA IGPAAAEEGS EKKYPKFVFG DYMDVYANQK FMPKEPRFLA VKTL

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.