Factsheet for GSMUA_AchrUn_randomP20420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	26.61	98.71
GSMUA_AchrUn_...	Banana	cytosol	46.78	98.53
GSMUA_AchrUn_...	Banana	cytosol	26.43	98.06
GSMUA_AchrUn_...	Banana	cytosol	41.22	87.13
GSMUA_Achr6P12910_001	Banana	cytosol	42.78	79.87
CDX88361	Canola	cytosol	9.74	69.14
CDY72562	Canola	cytosol	26.61	65.38
VIT_18s0001g01840.t01	Wine grape	cytosol	31.83	62.67
KRH53298	Soybean	nucleus	32.7	61.24
KRH64615	Soybean	cytosol	32.7	61.04
GSMUA_Achr10P...	Banana	cytosol	35.3	60.96
PGSC0003DMT400030740	Potato	cytosol	32.52	59.74
Solyc06g060070.2.1	Tomato	cytosol	32.35	59.24
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	31.48	58.96
CDY38352	Canola	cytosol	31.48	58.77
Bra003687.1-P	Field mustard	cytosol	31.13	58.69
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	32.52	58.62
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	31.13	58.31
Bra008302.1-P	Field mustard	cytosol	28.17	57.04
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	27.83	56.34
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	30.96	56.33
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	28.35	52.75
GSMUA_Achr1P18250_001	Banana	cytosol	22.43	40.95
GSMUA_Achr7P18420_001	Banana	cytosol	22.43	40.57
CDX88360	Canola	cytosol	6.43	38.95
GSMUA_Achr6P00870_001	Banana	cytosol	19.65	38.57
GSMUA_Achr5P09690_001	Banana	cytosol	18.61	31.2
GSMUA_AchrUn_...	Banana	cytosol	5.22	27.78

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG20420_001	EnsemblPlants:GSMUA_AchrUn_randomP20420_001
EnsemblPlants:GSMUA_AchrUn_randomT20420_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0UAV1	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189	SUPFAM:SSF51197
UniParc:UPI0002967D5D	SEG:seg	:	:	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG20420_001]

Coordinates

chrchrUn_random:+:99012649..99015822

Molecular Weight (calculated)

65231.5 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.422

Length

575 amino acids

Sequence
(BLAST)

001: MIPVIDFSKV DGEERAETLA QIANGCEEWG FFQLANHGIP VELLERVKKV CSACYKLRQE SFKESNPVQL LNKLVEEESE GRNVERLNDV DWEDVFVLQD
101: DKPWPSNPPE FKETMREYRK ELRKLAERVM EAMDENLGLE RGYISRAFSA NGEHEPFFGT KVSHYPPCPR LDLVDGLRAH TDAGGVILLF QDDEVGGLQI
201: LKDDKWVDVQ PVKHSIVINT GDQIEVLSNG RYKSVWHRVL VSSHGNRRSI ASFYNPSLKA TIAPATKLYK RSQLAPFLFI DPFEKQYRSI ICNHSIISSS
301: LEMAIPVIDF SKLEGKERAE TLARIANGCQ EWGFFQLVNH GIPVELLERV KKVCSECYRL RAEGFKASKP VQLLNKLVEE EGDAADAERL DNVDWEDVFL
401: LQDDNEWPAN PPEFRETMKE YREELRKLAE KVMEVMDENL GFEKGSIRNS FSGNGEHQPF FGTKVSHYPP CPRLEMVNGL RAHTDAGGVI LLFQDDQVGG
501: LQILKDGQWI DVQPVANAIV INTGDQIEAT IAPGTNKDGS ATALYPKYVF GDYMDVYVKQ KFLAKEPRFA AVRAV

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.