Factsheet for GSMUA_AchrUn_randomP26960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	87.87	87.55
GSMUA_AchrUn_...	Banana	cytosol	48.9	85.81
GSMUA_AchrUn_...	Banana	cytosol	48.9	85.81
GSMUA_Achr6P12910_001	Banana	cytosol	86.4	76.3
CDX88361	Canola	cytosol	20.96	70.37
CDY72562	Canola	cytosol	55.88	64.96
GSMUA_Achr10P...	Banana	cytosol	76.47	62.46
VIT_18s0001g01840.t01	Wine grape	cytosol	66.91	62.33
KRH64615	Soybean	cytosol	68.75	60.71
KRH53298	Soybean	nucleus	68.38	60.59
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	66.54	58.96
CDY38352	Canola	cytosol	66.54	58.77
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	68.75	58.62
PGSC0003DMT400030740	Potato	cytosol	67.28	58.47
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	65.81	58.31
Solyc06g060070.2.1	Tomato	cytosol	66.91	57.96
Bra008302.1-P	Field mustard	cytosol	60.29	57.75
Bra003687.1-P	Field mustard	cytosol	64.71	57.7
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	58.82	56.34
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	65.44	56.33
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	59.93	52.75
GSMUA_Achr7P18420_001	Banana	cytosol	49.26	42.14
GSMUA_Achr1P18250_001	Banana	cytosol	47.79	41.27
GSMUA_AchrUn_...	Banana	cytosol	87.13	41.22
CDX88360	Canola	cytosol	13.6	38.95
GSMUA_Achr6P00870_001	Banana	cytosol	39.34	36.52
GSMUA_AchrUn_...	Banana	cytosol	12.13	30.56
GSMUA_Achr5P09690_001	Banana	cytosol	37.5	29.74

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSMUA_AchrUn_randomG26960_001	EnsemblPlants:GSMUA_AchrUn_randomP26960_001	EnsemblPlants:GSMUA_AchrUn_randomT26960_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
UniProt:M0UCQ4	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF189	SUPFAM:SSF51197	UniParc:UPI00029570F3	:	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG26960_001]

Coordinates

chrchrUn_random:+:132016604..132017996

Molecular Weight (calculated)

30801.9 Da

IEP (calculated)

4.817

GRAVY (calculated)

-0.392

Length

272 amino acids

Sequence
(BLAST)

001: MAIPVIDFSK LKGKQRAETL AQIANGCEEW GFFQLVNHGI PVELLDRVKK VCSECYRLRA KGFKGSKPVQ LLNKLVEKEG EEADVKRLDN VDWEDVFLLQ
101: DDNEWPSNPP EFSEIMKEYR EELRKLAEKV MEVMDENMGF ENGYIKKVFS GNGEHQPFFG TKVSHYPPCP RLDLVNGLRA HTDAGGVILL FQDDQVGGLQ
201: ILKDGKWIDV QPVANAIVIN TGDQIEATIT PGISNDDAPA LYPKFVFGDY MEVYVKQKFT AKEPRFDAVR AM

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.