Factsheet for GSMUA_AchrUn_randomP28750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P18420_001	Banana	cytosol	83.33	28.3
GSMUA_Achr1P18250_001	Banana	cytosol	80.56	27.62
HORVU5Hr1G067490.2	Barley	cytosol	73.15	27.05
TraesCS6A01G325500.1	Wheat	cytosol	70.37	26.12
TraesCS5B01G232600.1	Wheat	cytosol	75.0	25.55
TraesCS5D01G241000.1	Wheat	cytosol	74.07	25.24
TraesCS5A01G234200.1	Wheat	cytosol	74.07	25.08
TraesCS5B01G232700.1	Wheat	cytosol	73.15	24.92
Os09t0451400-01	Rice	cytosol	74.07	24.84
Os09t0451000-01	Rice	cytosol	74.07	24.84
TraesCS5D01G241100.1	Wheat	cytosol	73.15	24.76
TraesCS5A01G234300.1	Wheat	cytosol	72.22	24.45
TraesCS6A01G325600.1	Wheat	cytosol	73.15	24.01
EES05870	Sorghum	cytosol	70.37	23.82
TraesCS6A01G325400.1	Wheat	cytosol	72.22	23.71
EER98995	Sorghum	cytosol	72.22	23.71
Os02t0771600-01	Rice	cytosol	70.37	23.68
Zm00001d020686_P001	Maize	cytosol	71.3	23.62
TraesCS6B01G356200.1	Wheat	cytosol	71.3	23.26
TraesCS6B01G355900.1	Wheat	cytosol	71.3	23.26
TraesCS6A01G325700.1	Wheat	cytosol	71.3	23.26
TraesCS6D01G305400.1	Wheat	cytosol	70.37	22.96
TraesCS6D01G305200.1	Wheat	cytosol	70.37	22.96
TraesCS6B01G355800.1	Wheat	extracellular	72.22	22.61
TraesCS6B01G356000.1	Wheat	cytosol	68.52	22.49
TraesCS6B01G355700.1	Wheat	cytosol	68.52	22.42
Zm00001d018211_P001	Maize	extracellular	65.74	22.4
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	73.15	22.32
Zm00001d052136_P001	Maize	cytosol	66.67	22.29
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	66.67	21.69
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	69.44	20.95
GSMUA_Achr6P12910_001	Banana	cytosol	50.93	17.86
GSMUA_Achr10P...	Banana	cytosol	53.7	17.42
GSMUA_Achr6P00870_001	Banana	cytosol	45.37	16.72
GSMUA_Achr5P09690_001	Banana	cytosol	41.67	13.12
GSMUA_AchrUn_...	Banana	cytosol	30.56	12.13
GSMUA_AchrUn_...	Banana	cytosol	27.78	10.99
GSMUA_AchrUn_...	Banana	cytosol	27.78	5.22
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP28750_001	EnsemblPlants:GSMUA_AchrUn_randomT28750_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG28750_001	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF383	PFAM:PF03171	SUPFAM:SSF51197
UniParc:UPI000296688F	UniProt:M0UD83	MapMan:50.1.13	:	:	:

Description

Probable 1-aminocyclopropane-1-carboxylate oxidase [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG28750_001]

Coordinates

chrchrUn_random:+:139442789..139443424

Molecular Weight (calculated)

12122.6 Da

IEP (calculated)

8.860

GRAVY (calculated)

-0.159

Length

108 amino acids

Sequence
(BLAST)

001: MRHSIVVNLG DQLEVITNGK YKSVLHRVVA QTDGNRMSIA SFYNPGSDAV VFPAPSLVQK EAEKDDVAAV YPRFVFEDYM KLYVIQKFQA KEPRFEAMKA
101: TALPIPTS

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.