Factsheet for TraesCS6D01G305200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G305400.1	Wheat	cytosol	95.77	95.77
TraesCS6B01G356200.1	Wheat	cytosol	95.17	95.17
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	92.14	91.87
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	93.66	86.59
EES05870	Sorghum	cytosol	83.08	86.21
Os02t0771600-01	Rice	cytosol	82.78	85.36
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	89.73	83.9
Zm00001d018211_P001	Maize	extracellular	80.06	83.6
Zm00001d052136_P001	Maize	cytosol	77.04	78.95
GSMUA_Achr7P18420_001	Banana	cytosol	67.98	70.75
GSMUA_AchrUn_...	Banana	cytosol	22.96	70.37
TraesCS5D01G241000.1	Wheat	cytosol	67.37	70.35
TraesCS5D01G241100.1	Wheat	cytosol	67.67	70.22
GSMUA_Achr1P18250_001	Banana	cytosol	64.95	68.25
TraesCS1D01G098100.1	Wheat	cytosol	47.13	50.65
TraesCS1D01G098000.1	Wheat	cytosol	47.13	50.65
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	41.99	47.44
TraesCS4D01G095500.1	Wheat	cytosol	44.71	46.84
TraesCS7D01G516200.1	Wheat	cytosol	39.58	41.2

Protein Annotations

EnsemblPlants:TraesCS6D01G305200.1	EnsemblPlantsGene:TraesCS6D01G305200	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF179	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.5.1.2	:

Description

No Description!

Coordinates

chr6D:-:414113400..414114913

Molecular Weight (calculated)

36782.8 Da

IEP (calculated)

4.824

GRAVY (calculated)

-0.273

Length

331 amino acids

Sequence
(BLAST)

001: MAIPANAAAS MSFPMINMEK LETEERGAAM EVIQDACENW GFFELLNHGI SHELMDEVER VSKAHYAACR EEQFKEFAAK TLEAGEKGAD VKDVDWESTF
101: FVRHLPASNL ADLPDLDHHY RQVMKEFASE IERLAEKVLD LLCENLGLEQ GYLKRAFAGS RGPTFGTKVS SYPPCPRPDM VDGLRAHTDA GGVILLFQDD
201: QVSGLQLLKD GAWVEVPPMR HAIVVNIGDQ LEVITNGRYK SVMHRVLTRP DGNRMSIASF YNPGADAIIF PAPALVGAAD AAERNEGEEG TAVYPRFVFE
301: DYMNLYVRHK FEAKEPRFKA MKADAAPIAT A

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.