Factsheet for TraesCS5D01G241100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G232700.1	Wheat	cytosol	96.55	97.16
TraesCS5A01G234300.1	Wheat	cytosol	94.98	94.98
TraesCS5D01G241000.1	Wheat	cytosol	94.36	94.95
Zm00001d020686_P001	Maize	cytosol	87.15	85.28
Os09t0451400-01	Rice	cytosol	84.33	83.54
Os09t0451000-01	Rice	cytosol	84.01	83.23
EER98995	Sorghum	cytosol	84.64	82.07
GSMUA_AchrUn_...	Banana	cytosol	24.76	73.15
GSMUA_Achr7P18420_001	Banana	cytosol	72.1	72.33
GSMUA_Achr1P18250_001	Banana	cytosol	67.71	68.57
TraesCS6D01G305200.1	Wheat	cytosol	70.22	67.67
TraesCS6D01G305400.1	Wheat	cytosol	68.34	65.86
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	69.59	62.71
TraesCS1D01G098000.1	Wheat	cytosol	49.22	50.97
TraesCS1D01G098100.1	Wheat	cytosol	49.22	50.97
TraesCS4D01G095500.1	Wheat	cytosol	47.34	47.78
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	43.89	47.78
TraesCS7D01G516200.1	Wheat	cytosol	43.57	43.71

Protein Annotations

EnsemblPlants:TraesCS5D01G241100.1	EnsemblPlantsGene:TraesCS5D01G241100	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF383	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.5.1.2	:

Description

No Description!

Coordinates

chr5D:+:350220088..350221421

Molecular Weight (calculated)

35914.8 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.317

Length

319 amino acids

Sequence
(BLAST)

001: MAPASSFPII DMGLLAGEER PAAMDLLHDA CENWGFFQVL DHGISTELMD EVEKMTKEHY KRVREQRFLE FASKTLEDGG RAAENLDWES TFFVRHLPEP
101: NIAEIPDLDE EYRRVMKQFA AELERLAERL LDLLCENLGL EKGYLTRAFR GSKGVPTFGT KVSSYPPCPR PDLVKGLRAH TDAGGIILLF QDDRVGGLQL
201: LRDGEWVDVP PTRHSIVVNL GDQLEVITNG RYKSVLHRVV AQADGNRMSI ASFYNPASDA VIFPAPALAE AEAAGGAYPR FVFEDYMKLY VRHKFEDKEP
301: RFEAFKSMES QSTKLIATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.