Factsheet for TraesCS5D01G241000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G232600.1	Wheat	cytosol	95.58	95.58
TraesCS5A01G234200.1	Wheat	cytosol	95.27	94.67
TraesCS5D01G241100.1	Wheat	cytosol	94.95	94.36
HORVU5Hr1G067490.2	Barley	cytosol	85.49	92.81
Zm00001d020686_P001	Maize	cytosol	86.75	84.36
Os09t0451000-01	Rice	cytosol	84.86	83.54
Os09t0451400-01	Rice	cytosol	84.86	83.54
EER98995	Sorghum	cytosol	85.17	82.07
GSMUA_AchrUn_...	Banana	cytosol	25.24	74.07
GSMUA_Achr7P18420_001	Banana	cytosol	72.87	72.64
GSMUA_Achr1P18250_001	Banana	cytosol	68.14	68.57
TraesCS6D01G305200.1	Wheat	cytosol	70.35	67.37
TraesCS6D01G305400.1	Wheat	cytosol	69.4	66.47
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	70.03	62.71
TraesCS1D01G098100.1	Wheat	cytosol	49.21	50.65
TraesCS1D01G098000.1	Wheat	cytosol	49.21	50.65
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	44.16	47.78
TraesCS4D01G095500.1	Wheat	cytosol	47.32	47.47
TraesCS7D01G516200.1	Wheat	cytosol	43.53	43.4

Protein Annotations

EnsemblPlants:TraesCS5D01G241000.1	EnsemblPlantsGene:TraesCS5D01G241000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF383	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.5.1.2	:

Description

No Description!

Coordinates

chr5D:-:349980675..349981895

Molecular Weight (calculated)

35728.7 Da

IEP (calculated)

5.455

GRAVY (calculated)

-0.336

Length

317 amino acids

Sequence
(BLAST)

001: MASTLSFPII DMGLLRGEER PAAMNLLHDA CQNWGFFQVL DHGISTELMD EVEKMTKEHY KRVREQRFLE FASKTLQDGD KAAENLDWES TFFVRHLPEP
101: NIAEIPDLDD EYRRVMKQFA AELERLAERL LDLLCENLGL EKGYLTRAFR GSKGVPTFGT KVSSYPPCPR PDLVKGLRAH TDAGGIILLF QDDRVGGLQL
201: LKDGEWVDVP PTRHSIVVNL GDQLEVITNG RYKSVLHRVV AQADGNRMSI ASFYNPASDA VIFPAPALAE AAGGAYPRFV FEDYMKLYVR HKFEDKEPRF
301: EAFKSMGSQT SNPIATA

Best Arabidopsis Sequence Match ( AT1G62380.1 )
(BLAST)

001: MEKNMKFPVV DLSKLNGEER DQTMALINEA CENWGFFEIV NHGLPHDLMD KIEKMTKDHY KTCQEQKFND MLKSKGLDNL ETEVEDVDWE STFYVRHLPQ
101: SNLNDISDVS DEYRTAMKDF GKRLENLAED LLDLLCENLG LEKGYLKKVF HGTKGPTFGT KVSNYPPCPK PEMIKGLRAH TDAGGIILLF QDDKVSGLQL
201: LKDGDWIDVP PLNHSIVINL GDQLEVITNG KYKSVLHRVV TQQEGNRMSV ASFYNPGSDA EISPATSLVE KDSEYPSFVF DDYMKLYAGV KFQPKEPRFA
301: AMKNASAVTE LNPTAAVETF

Arabidopsis Description

ACO21-aminocyclopropane-1-carboxylate oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q41931]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.