Factsheet for TraesCS6D01G305100.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G325500.1	Wheat	cytosol	76.84	93.47
TraesCS6D01G305200.1	Wheat	cytosol	83.9	89.73
TraesCS6B01G355900.1	Wheat	cytosol	83.62	89.43
TraesCS6D01G305400.1	Wheat	cytosol	82.49	88.22
TraesCS6B01G355800.1	Wheat	extracellular	85.59	87.83
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	81.92	87.35
Os02t0771600-01	Rice	cytosol	76.55	84.42
EES05870	Sorghum	cytosol	75.99	84.33
Zm00001d018211_P001	Maize	extracellular	73.16	81.7
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	81.92	81.01
Zm00001d052136_P001	Maize	cytosol	71.75	78.64
GSMUA_AchrUn_...	Banana	cytosol	22.32	73.15
GSMUA_Achr7P18420_001	Banana	cytosol	63.84	71.07
TraesCS5D01G241000.1	Wheat	cytosol	62.71	70.03
TraesCS5D01G241100.1	Wheat	cytosol	62.71	69.59
GSMUA_Achr1P18250_001	Banana	cytosol	61.58	69.21
TraesCS1D01G098100.1	Wheat	cytosol	45.48	52.27
TraesCS1D01G098000.1	Wheat	cytosol	45.48	52.27
TraesCS4D01G095500.1	Wheat	cytosol	42.66	47.78
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	38.42	46.42
TraesCS7D01G516200.1	Wheat	cytosol	37.01	41.2

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF179	SUPFAM:SSF51197	EnsemblPlantsGene:TraesCS6D01G305100	EnsemblPlants:TraesCS6D01G305100.2	SEG:seg

Description

No Description!

Coordinates

chr6D:-:414077586..414078747

Molecular Weight (calculated)

39440.9 Da

IEP (calculated)

4.827

GRAVY (calculated)

-0.224

Length

354 amino acids

Sequence
(BLAST)

001: MGIPANATAS FSFPVINMEK LETQERGAAM GVIGDACENW GFFELLNHGI SHELLDEVER ASKAHYAACR EEQFKEFAAK TLEAGEKGAD VKDVDWESTF
101: FVRHLPASNL ADLPDLDHHY RYTHLSDWNG IIFLASDTLP FPCRRCRQVM KEFAAEIEKL AEKVLDLLCE NLGLELGYLK QAFAGSWGPT FGTKVSSYPP
201: CPRPDMVDGL RAHTDAGGVI MLFQDDQVSG LQLLKDGAWV DVPPMRHAIV VNIGDQLEVI TNGRYKSVMH RVLTRPDGNR MSIASFYNPG ADAVIFPATA
301: LVEEPSEEAE RAGSAVYPRF VFEDYMNLYM RHKFEAKEPR FEAMKADAAP IATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.