Factsheet for Zm00001d052136_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018211_P001	Maize	extracellular	87.93	89.59
EES05870	Sorghum	cytosol	87.62	88.71
Os02t0771600-01	Rice	cytosol	80.19	80.69
TraesCS6A01G325600.1	Wheat	cytosol	80.5	79.03
TraesCS6A01G325500.1	Wheat	cytosol	70.59	78.35
TraesCS6A01G325400.1	Wheat	cytosol	79.26	77.81
TraesCS6B01G356200.1	Wheat	cytosol	79.57	77.64
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	79.57	77.41
TraesCS6B01G355900.1	Wheat	cytosol	79.26	77.34
TraesCS6B01G356000.1	Wheat	cytosol	78.64	77.2
TraesCS6D01G305400.1	Wheat	cytosol	78.95	77.04
TraesCS6D01G305200.1	Wheat	cytosol	78.95	77.04
TraesCS6B01G355700.1	Wheat	cytosol	78.64	76.97
TraesCS6A01G325700.1	Wheat	cytosol	78.33	76.44
TraesCS6B01G355800.1	Wheat	extracellular	78.95	73.91
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	78.64	71.75
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	79.26	71.51
GSMUA_Achr7P18420_001	Banana	cytosol	66.56	67.61
Zm00001d020686_P001	Maize	cytosol	67.8	67.18
GSMUA_AchrUn_...	Banana	cytosol	22.29	66.67
GSMUA_Achr1P18250_001	Banana	cytosol	64.71	66.35
Zm00001d024850_P001	Maize	cytosol	47.37	48.57
Zm00001d024851_P001	Maize	cytosol	47.37	48.57
Zm00001d024852_P001	Maize	cytosol	47.37	48.57
Zm00001d024843_P001	Maize	cytosol	46.75	48.09
Zm00001d004719_P001	Maize	cytosol	45.82	47.74
Zm00001d004718_P001	Maize	cytosol	45.82	47.74
Zm00001d005927_P001	Maize	cytosol	32.51	46.46
Zm00001d015860_P001	Maize	cytosol	33.44	46.15
Zm00001d000163_P001	Maize	extracellular	44.58	46.01
Zm00001d036955_P001	Maize	cytosol	40.25	44.37
Zm00001d011208_P001	Maize	cytosol	42.41	43.22
Zm00001d024853_P001	Maize	plastid	47.37	42.98
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.48	35.38
Zm00001d044978_P001	Maize	extracellular	5.26	13.82

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:542137	ProteinID:AQK56291.1	EMBL:AY359575	EMBL:BT040515
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF179
UniProt:Q6JN54	SUPFAM:SSF51197	UniParc:UPI000037857E	EnsemblPlantsGene:Zm00001d052136	EnsemblPlants:Zm00001d052136_P001	EnsemblPlants:Zm00001d052136_T001

Description

1-aminocyclopropane-1-carboxylate oxidase20 1-aminocyclopropane-1-carboxylate oxidase20

Coordinates

chr4:-:180604677..180607029

Molecular Weight (calculated)

35553.0 Da

IEP (calculated)

4.731

GRAVY (calculated)

-0.251

Length

323 amino acids

Sequence
(BLAST)

001: MAATVSFPVV NMEKLETEER DTAMAVIRDA CENWGFFELL NHGISHELMD EVERLTKAHY ATFREAKFQE FAARTLAAAG DEGADVSDVD WESTFFVRHL
101: PASNLADLPD VDDHYRQVMK QFASEVQKLS EKVLDLLCEN LGLEPGYLKA AFAGSDGGPT FGTKVSAYPP CPRPDLVAGL RAHTDAGGLI LLLQDDQVSG
201: LQLLRGGDGG EWVDVPPLRH AIVANVGDQL EVVTNGRYKS AVHRVLARPD GNRMSVASFY NPGADAVIFP APALVGEEER AEKKATTYPR FVFEDYMNLY
301: ARHKFEAKEP RFEAMKSSAI ATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.