Factsheet for TraesCS6A01G325600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G325400.1	Wheat	cytosol	95.44	95.44
TraesCS6A01G325500.1	Wheat	cytosol	83.59	94.5
TraesCS6A01G325700.1	Wheat	cytosol	89.97	89.43
TraesCS6B01G355700.1	Wheat	cytosol	89.36	89.09
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	89.36	88.55
EES05870	Sorghum	cytosol	82.98	85.58
Os02t0771600-01	Rice	cytosol	82.67	84.74
Zm00001d018211_P001	Maize	extracellular	79.94	82.97
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	89.67	82.4
Zm00001d052136_P001	Maize	cytosol	79.03	80.5
GSMUA_AchrUn_...	Banana	cytosol	24.01	73.15
GSMUA_Achr7P18420_001	Banana	cytosol	70.21	72.64
TraesCS5A01G234200.1	Wheat	cytosol	68.69	70.85
TraesCS5A01G234300.1	Wheat	cytosol	68.69	70.85
GSMUA_Achr1P18250_001	Banana	cytosol	67.78	70.79
TraesCS1A01G089500.1	Wheat	cytosol	48.94	52.27
TraesCS1A01G089600.1	Wheat	cytosol	48.63	51.95
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	42.86	48.12
TraesCS4A01G221300.1	Wheat	cytosol	45.59	47.92

Protein Annotations

EnsemblPlants:TraesCS6A01G325600.1	EnsemblPlantsGene:TraesCS6A01G325600	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF179	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.5.1.2	:

Description

No Description!

Coordinates

chr6A:-:559132107..559133532

Molecular Weight (calculated)

36476.5 Da

IEP (calculated)

4.889

GRAVY (calculated)

-0.230

Length

329 amino acids

Sequence
(BLAST)

001: MAIPANAAAS LSFPVINMEK LETEERGAAM GLIGDACENW GFFELLNHGI SHELMNEVER VSKAHYTACR EDKFKEFAAK TLEAGEKGAD VKDVDWESTF
101: FVRHLPASNL ADLPDLDHHY RQVMKEFAAE IEKLAEKVLD LLCENLGLEQ GYLKRAFAGS RGPTFGTKVS SYPPCPRPDL VAGLRAHTDA GGVILLFQDD
201: QVSGLQLLKD GAWVDVPPMR HAIVVNIGDQ LEVITNGRYK SVMHRVLTRP DGNRMSLASF YNPGADAVIF PAPALVEELS EEEAERAGSA VYPRFVFEDY
301: MNLYMRHKFE AKEPRFEAMK ADAAPIATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.