Factsheet for TraesCS6B01G356200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G356000.1	Wheat	cytosol	96.98	97.57
TraesCS6D01G305200.1	Wheat	cytosol	95.17	95.17
TraesCS6B01G355900.1	Wheat	cytosol	94.56	94.56
TraesCS6B01G355700.1	Wheat	cytosol	91.54	91.82
HORVU6Hr1G079640.3	Barley	cytosol, extracellular, peroxisome	91.84	91.57
EES05870	Sorghum	cytosol	83.69	86.83
HORVU6Hr1G079600.2	Barley	cytosol, mitochondrion, peroxisome, plastid	92.75	85.75
Os02t0771600-01	Rice	cytosol	83.08	85.67
TraesCS6B01G355800.1	Wheat	extracellular	89.12	85.51
Zm00001d018211_P001	Maize	extracellular	80.66	84.23
Zm00001d052136_P001	Maize	cytosol	77.64	79.57
GSMUA_Achr7P18420_001	Banana	cytosol	68.88	71.7
GSMUA_AchrUn_...	Banana	cytosol	23.26	71.3
TraesCS5B01G232600.1	Wheat	cytosol	68.28	71.29
TraesCS5B01G232700.1	Wheat	cytosol	66.77	69.72
GSMUA_Achr1P18250_001	Banana	cytosol	65.56	68.89
TraesCS1B01G117400.1	Wheat	cytosol	48.04	51.62
TraesCS1B01G117500.1	Wheat	cytosol	47.73	51.3
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	42.9	48.46
TraesCS7B01G444900.1	Wheat	cytosol	41.69	43.4

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF179	SUPFAM:SSF51197	EnsemblPlantsGene:TraesCS6B01G356200	EnsemblPlants:TraesCS6B01G356200.1	SEG:seg

Description

No Description!

Coordinates

chr6B:-:624495761..624497229

Molecular Weight (calculated)

36578.5 Da

IEP (calculated)

5.149

GRAVY (calculated)

-0.229

Length

331 amino acids

Sequence
(BLAST)

001: MAIPANAAVS LNFPVINMEK LETGERGAAM EVIHDACQNW GFFELLNHGI SAELMDEVER VSKAHYAACR EDKFKEFAAK TLEAGEKGAD VKDVDWESTF
101: FVRHLPASNL ADLPDLDHHY RQVMKEFASE IEKLAEKVLD LLCENLGLEP GYLKRAFAGS RGPTFGTKVS SYPPCPRPDL VDGLRAHTDA GGVILLFQDD
201: QVSGLQLLKD GAWVDVPPMR HAIVVNIGDQ LEVITNGRYK SVMHRVLTRH DGNRMSIASF YNPGADAVIF PAPALVGAAD AAERNEGEEG TAVYPRFVFE
301: DYMNLYVRHK FEAKEPRFKA MKADAAPIAT A

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.