Factsheet for VIT_00s2086g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 3
vacuole 3
peroxisome 1
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, secretory
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g01380.t01	Wine grape	cytosol	85.51	55.66
VIT_18s0001g01840.t01	Wine grape	cytosol	60.39	42.81
VIT_11s0016g02380.t01	Wine grape	cytosol	55.07	37.25
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.55	33.08
Zm00001d044978_P001	Maize	extracellular	2.9	4.88

Protein Annotations

EntrezGene:100232928	wikigene:100232928	MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:ACO1	wikigene:ACO1
ProteinID:CCB62987	ProteinID:CCB62987.1	UniProt:F6I7R7	EMBL:FN596969	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009987
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF383	SUPFAM:SSF51197
TIGR:TC56709	UniParc:UPI0002108F35	ArrayExpress:VIT_00s2086g00010	EnsemblPlantsGene:VIT_00s2086g00010	EnsemblPlants:VIT_00s2086g00010.t01	unigene:Vvi.4117
RefSeq:XP_002273430	RefSeq:XP_002273430.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:41034442..41035462

Molecular Weight (calculated)

23025.0 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.200

Length

207 amino acids

Sequence
(BLAST)

001: KAMKEFTAHL EKLAELLLDL LCENLGLEKG YLKKAFYGSQ GPSFGTKVSN YPPCPQPELI KGLRAHTDAG GIILLFQDDK VSGLQLLKDG QWIDVPPMRH
101: SIVINLGDQL EVITNGKYKS VMHRVIAQTD GNRMSLASFY NPGSDAVIYP APALVEKEKE TSEVYPKFVF EDYMKLYAGL KFQAKEPRFE AMKAMEPTVN
201: LGPIATV

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.