CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14788	Soybean	cytosol	97.72	97.72
KRH14787	Soybean	cytosol	97.39	97.39
KRH73354	Soybean	cytosol	60.91	94.92
KRH73352	Soybean	cytosol	92.51	92.51
KRH73355	Soybean	cytosol	26.71	88.17
KRH41775	Soybean	cytosol	87.62	86.77
KRH73345	Soybean	nucleus	81.11	79.05
KRH14794	Soybean	nucleus	80.78	78.73
VIT_12s0059g01380.t01	Wine grape	cytosol	78.5	75.79
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	75.9	73.27
KRH02009	Soybean	cytosol	75.9	73.04
KRH36520	Soybean	cytosol	74.92	72.33
KRH11502	Soybean	cytosol	74.59	72.01
KRH53298	Soybean	nucleus	52.44	52.44
KRH64615	Soybean	cytosol	52.12	51.95
KRH60136	Soybean	endoplasmic reticulum	50.49	50.49
KRH41426	Soybean	cytosol	50.49	50.49
KRH49052	Soybean	cytosol	49.51	49.67
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.57	38.46
Zm00001d044978_P001	Maize	extracellular	5.21	13.01

Protein Annotations

EntrezGene:100780155	MapMan:11.5.1.2	Gene3D:2.60.120.330	EMBL:ACUP02008524	ncoils:Coil	InterPro:DIOX_N
EnsemblPlantsGene:GLYMA_14G049200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
UniProt:I1M7I0	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH14791	ProteinID:KRH14791
ProteinID:KRH14791.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF193	SUPFAM:SSF51197	UniParc:UPI000233ACF5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:+:3807941..3809714

Molecular Weight (calculated)

35023.9 Da

IEP (calculated)

5.299

GRAVY (calculated)

-0.431

Length

307 amino acids

Sequence
(BLAST)

001: MENFPVINLE NLNGEARKAT LHQIEDACQN WGFFELVNHG IPLELLDTVE RLTKEHYRKC MEKRFKEAVS SKGLEDEVKD MDWESTFFLR HLPTSNISEI
101: PDLSQEYRDA MKEFAQKLEK LAEELLDLLC ENLGLEKGYL KNAFYGSRGP NFGTKVANYP ACPKPELVKG LRAHTDAGGI ILLLQDDKVS GLQLLKNGQW
201: VDVPPMRHSI VVNLGDQIEV ITNGRYKSVE HRVIAQTNGT RMSVASFYNP ASDALIYPAP ALLEQKAEDT EQVYPKFVFE DYMKLYATLK FQPKEPRFEA
301: MKAVNSF

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.