CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73354	Soybean	cytosol	56.77	89.34
KRH73355	Soybean	cytosol	26.77	89.25
KRH14791	Soybean	cytosol	86.77	87.62
KRH73352	Soybean	cytosol	86.45	87.3
KRH14788	Soybean	cytosol	86.13	86.97
KRH14787	Soybean	cytosol	85.81	86.64
KRH73345	Soybean	nucleus	81.29	80.0
KRH14794	Soybean	nucleus	80.97	79.68
VIT_12s0059g01380.t01	Wine grape	cytosol	80.0	77.99
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	77.42	75.47
KRH02009	Soybean	cytosol	76.77	74.61
KRH11502	Soybean	cytosol	76.45	74.53
KRH36520	Soybean	cytosol	75.81	73.9
KRH53298	Soybean	nucleus	51.61	52.12
KRH64615	Soybean	cytosol	50.97	51.3
KRH41426	Soybean	cytosol	49.35	49.84
KRH60136	Soybean	endoplasmic reticulum	48.71	49.19
KRH49052	Soybean	cytosol	47.1	47.71
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	31.29	37.31
Zm00001d044978_P001	Maize	extracellular	5.48	13.82

Protein Annotations

EntrezGene:100792063	MapMan:11.5.1.2	Gene3D:2.60.120.330	EMBL:ACUP02004781	ncoils:Coil	InterPro:DIOX_N
EnsemblPlantsGene:GLYMA_08G050400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
UniProt:I1KQG3	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH41775	ProteinID:KRH41775
ProteinID:KRH41775.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF193	SUPFAM:SSF51197	UniParc:UPI00023C59B0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:3949850..3951688

Molecular Weight (calculated)

35515.7 Da

IEP (calculated)

5.495

GRAVY (calculated)

-0.410

Length

310 amino acids

Sequence
(BLAST)

001: MENFPVINLE NLNGEERKTI LEQIEDACEN WGFFELVNHG IPHELLDIVE RLTKEHYRKC MEQRFKEAVA SKGLEGIQAE VKDMNWESTF FLRHLPDSNI
101: SQIPDLSEEY RKVMKEFAQK LEKLAEKLLD LLCENLGLEK GYLKKVFYGS KGPNFGTKVA NYPPCPNPEL VKGLRAHTDA GGIILLLQDD KVSGLQLLKD
201: GHWVDVPPMR HSIVVNLGDQ LEVITNGRYK SVELRVIART DGTRMSIASF YNPASDAVIY PAPALLDSKA EETDKVYPKF VFEDYMRLYA TLKFQPKEPR
301: FQAMKEVNSF

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.