Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0146g00390.t01 | Wine grape | extracellular | 75.78 | 76.73 |
| VIT_00s0246g00220.t01 | Wine grape | extracellular | 75.16 | 76.1 |
| GRMZM5G816772_P01 | Maize | extracellular | 70.81 | 74.51 |
| PGSC0003DMT400029511 | Potato | extracellular | 71.43 | 73.72 |
| BAC19860 | Rice | plasma membrane | 70.81 | 73.55 |
| TraesCS2B01G265400.1 | Wheat | extracellular, golgi | 70.19 | 72.9 |
| TraesCS5A01G020100.1 | Wheat | golgi | 69.57 | 71.79 |
| TraesCSU01G245500.1 | Wheat | extracellular | 68.94 | 71.15 |
| TraesCS7D01G464300.1 | Wheat | extracellular, vacuole | 68.94 | 71.15 |
| TraesCS5A01G430400.1 | Wheat | extracellular | 68.94 | 71.15 |
| TraesCS2D01G230200.1 | Wheat | extracellular, golgi | 68.94 | 71.15 |
| TraesCS3B01G430700.1 | Wheat | endoplasmic reticulum, extracellular | 68.32 | 70.97 |
| TraesCS1A01G140100.1 | Wheat | extracellular, golgi | 68.32 | 70.51 |
| TraesCS3A01G142300.1 | Wheat | extracellular, plasma membrane | 68.32 | 70.51 |
| ATMG00480.1 | Thale cress | extracellular | 68.94 | 70.25 |
| AT2G07707.1 | Thale cress | extracellular | 68.94 | 70.25 |
| BAV58133 | Barley | endoplasmic reticulum, extracellular | 67.7 | 69.87 |
| TraesCS7B01G051100.1 | Wheat | endoplasmic reticulum, extracellular | 67.08 | 69.23 |
| TraesCS6D01G168600.1 | Wheat | extracellular, plasma membrane | 66.46 | 68.59 |
| TraesCS4B01G146500.1 | Wheat | extracellular | 66.46 | 68.59 |
| HORVU7Hr1G089600.1 | Barley | extracellular | 65.84 | 67.95 |
| TraesCS3D01G410500.1 | Wheat | extracellular, plasma membrane | 65.84 | 67.95 |
| TraesCS3D01G520800.1 | Wheat | extracellular, vacuole | 65.84 | 67.95 |
| PGSC0003DMT400034190 | Potato | cytosol | 23.6 | 67.86 |
| HORVU4Hr1G059430.1 | Barley | extracellular, golgi | 63.35 | 65.38 |
| TraesCS7A01G164600.1 | Wheat | extracellular | 60.87 | 62.82 |
| HORVU6Hr1G039040.1 | Barley | cytosol | 45.96 | 58.73 |
| KRH62975 | Soybean | endoplasmic reticulum, mitochondrion | 42.24 | 53.97 |
| CDY45297 | Canola | extracellular | 24.84 | 41.24 |
| HORVU2Hr1G034000.1 | Barley | cytosol | 24.22 | 30.71 |
| CDY65732 | Canola | endoplasmic reticulum, extracellular, golgi | 41.61 | 15.44 |
| ATMG00500.1 | Thale cress | mitochondrion | 9.32 | 10.64 |
| AT2G07708.1 | Thale cress | mitochondrion | 9.32 | 10.64 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP14210_001 | EnsemblPlants:GSMUA_AchrUn_randomT14210_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG14210_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0016020 | GO:GO:0016021 | InterPro:YMF19 | InterPro:YMF19-like_N |
| KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 | PANTHER:PTHR36816 | PFAM:PF02326 | PFAM:PF06449 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00029529B4 | UniProt:M0U930 | MapMan:2.4.6.1.6 | : | : |
Description
Putative ATP synthase protein YMF19 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14210_001]
Coordinates
chrchrUn_random:+:66986525..66987438
Molecular Weight (calculated)
18350.4 Da
IEP (calculated)
9.529
GRAVY (calculated)
0.193
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQLDKFTFF TQFFWSCLIL FLFYILICND GYGVLGISRI LKLRNQLLSH RGNNIPIGDP NCFADISIKG FRTGVSYMYS SLFEVSQWCA IISSFDSFGK
101: RRIITFIESL GEISGSRGME RRIIYLISKS SYNTSSSRIT CRNSIMLIHV PHGQGSIFNT P
101: RRIITFIESL GEISGSRGME RRIIYLISKS SYNTSSSRIT CRNSIMLIHV PHGQGSIFNT P
001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK
Arabidopsis Description
YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.