Factsheet for GRMZM5G816772_P01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

extracellular: 20408568
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G020100.1	Wheat	golgi	96.08	94.23
BAC19860	Rice	plasma membrane	95.42	94.19
TraesCSU01G245500.1	Wheat	extracellular	95.42	93.59
TraesCS5A01G430400.1	Wheat	extracellular	95.42	93.59
TraesCS2B01G265400.1	Wheat	extracellular, golgi	94.77	93.55
TraesCS7D01G464300.1	Wheat	extracellular, vacuole	94.77	92.95
TraesCS2D01G230200.1	Wheat	extracellular, golgi	94.77	92.95
TraesCS1A01G140100.1	Wheat	extracellular, golgi	94.77	92.95
BAV58133	Barley	endoplasmic reticulum, extracellular	94.12	92.31
TraesCS3A01G142300.1	Wheat	extracellular, plasma membrane	94.12	92.31
TraesCS7B01G051100.1	Wheat	endoplasmic reticulum, extracellular	92.81	91.03
TraesCS3B01G430700.1	Wheat	endoplasmic reticulum, extracellular	92.16	90.97
HORVU7Hr1G089600.1	Barley	extracellular	92.16	90.38
TraesCS3D01G520800.1	Wheat	extracellular, vacuole	92.16	90.38
TraesCS4B01G146500.1	Wheat	extracellular	91.5	89.74
TraesCS3D01G410500.1	Wheat	extracellular, plasma membrane	91.5	89.74
TraesCS6D01G168600.1	Wheat	extracellular, plasma membrane	90.85	89.1
HORVU4Hr1G059430.1	Barley	extracellular, golgi	86.93	85.26
TraesCS7A01G164600.1	Wheat	extracellular	84.31	82.69
HORVU6Hr1G039040.1	Barley	cytosol	62.75	76.19
VIT_01s0146g00390.t01	Wine grape	extracellular	78.43	75.47
VIT_00s0246g00220.t01	Wine grape	extracellular	77.78	74.84
PGSC0003DMT400029511	Potato	extracellular	75.82	74.36
ATMG00480.1	Thale cress	extracellular	76.47	74.05
AT2G07707.1	Thale cress	extracellular	76.47	74.05
GSMUA_AchrUn_...	Banana	extracellular	74.51	70.81
PGSC0003DMT400034190	Potato	cytosol	24.84	67.86
KRH62975	Soybean	endoplasmic reticulum, mitochondrion	43.79	53.17
CDY45297	Canola	extracellular	30.07	47.42
HORVU2Hr1G034000.1	Barley	cytosol	32.68	39.37
CDY65732	Canola	endoplasmic reticulum, extracellular, golgi	45.75	16.13
ATMG00500.1	Thale cress	mitochondrion	11.76	12.77
AT2G07708.1	Thale cress	mitochondrion	11.76	12.77

Protein Annotations

EnsemblPlants:GRMZM5G816772_P01	EnsemblPlants:GRMZM5G816772_T01	EnsemblPlantsGene:GRMZM5G816772	EntrezGene:4055890	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0016020	GO:GO:0016021	InterPro:YMF19
InterPro:YMF19-like_N	KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	PANTHER:PTHR36816	PFAM:PF02326	PFAM:PF06449
ProteinID:AAR91084.1	TMHMM:TMhelix	UniParc:UPI0000233F1D	UniProt:Q6R9G5	MapMan:2.4.6.1.6	:

Description

ATPase subunit 8 [Source:UniProtKB/TrEMBL;Acc:Q6R9G5]

Coordinates

chrMt:-:232091..233200

Molecular Weight (calculated)

17734.5 Da

IEP (calculated)

10.291

GRAVY (calculated)

-0.201

Length

153 amino acids

Sequence
(BLAST)

001: MPQLDKLTYF SQFFWLCLLL FTFYILFYNN NNGILGISRI LKLRNQLLSH RGNKIRSKDP NNLEDISRKG FSTGLSYMYS SLSEVSQWTV DYLGKRRKIT
101: LISDFGEISG SRGMERQILY LISKSSYNTS SSRITCWKNI MLTHVPHGQG SII

Best Arabidopsis Sequence Match ( ATMG00480.1 )
(BLAST)

001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK

Arabidopsis Description

YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.