Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G051100.1 | Wheat | endoplasmic reticulum, extracellular | 96.13 | 95.51 |
| TraesCS4B01G146500.1 | Wheat | extracellular | 96.13 | 95.51 |
| BAV58133 | Barley | endoplasmic reticulum, extracellular | 96.13 | 95.51 |
| TraesCS3D01G410500.1 | Wheat | extracellular, plasma membrane | 95.48 | 94.87 |
| TraesCS2B01G265400.1 | Wheat | extracellular, golgi | 94.19 | 94.19 |
| HORVU7Hr1G089600.1 | Barley | extracellular | 93.55 | 92.95 |
| GRMZM5G816772_P01 | Maize | extracellular | 90.97 | 92.16 |
| BAC19860 | Rice | plasma membrane | 91.61 | 91.61 |
| TraesCS7A01G164600.1 | Wheat | extracellular | 87.74 | 87.18 |
| HORVU4Hr1G059430.1 | Barley | extracellular, golgi | 87.1 | 86.54 |
| VIT_01s0146g00390.t01 | Wine grape | extracellular | 74.19 | 72.33 |
| VIT_00s0246g00220.t01 | Wine grape | extracellular | 73.55 | 71.7 |
| ATMG00480.1 | Thale cress | extracellular | 72.9 | 71.52 |
| AT2G07707.1 | Thale cress | extracellular | 72.9 | 71.52 |
| PGSC0003DMT400029511 | Potato | extracellular | 70.32 | 69.87 |
| GSMUA_AchrUn_... | Banana | extracellular | 70.97 | 68.32 |
| PGSC0003DMT400034190 | Potato | cytosol | 23.87 | 66.07 |
| KRH62975 | Soybean | endoplasmic reticulum, mitochondrion | 41.29 | 50.79 |
| CDY45297 | Canola | extracellular | 28.39 | 45.36 |
| CDY65732 | Canola | endoplasmic reticulum, extracellular, golgi | 45.16 | 16.13 |
| ATMG00500.1 | Thale cress | mitochondrion | 11.61 | 12.77 |
| AT2G07708.1 | Thale cress | mitochondrion | 11.61 | 12.77 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G430700.1 | EnsemblPlantsGene:TraesCS3B01G430700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0016020 | GO:GO:0016021 | InterPro:YMF19 | InterPro:YMF19-like_N | KEGG:00190+3.6.3.14 |
| KEGG:00195+3.6.3.14 | PANTHER:PTHR36816 | PFAM:PF02326 | PFAM:PF06449 | SEG:seg | TMHMM:TMhelix |
| MapMan:2.4.6.1.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:669816204..669816678
Molecular Weight (calculated)
17815.8 Da
IEP (calculated)
10.216
GRAVY (calculated)
-0.088
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQLDKLTYF SQFFWLCLLL FTFYILLFNN NNAILGISRI LKLRNQLLSR RGGEIQSKDP KNLEDISRKG FSTGLSYMYS SLSEVSQWCK TVDYLGKRRK
101: ITLISDVGEI SGSRGMERQI LYLISKSSYN TSSSRITCWK IMLTHVPHGQ GSIVL
101: ITLISDVGEI SGSRGMERQI LYLISKSSYN TSSSRITCWK IMLTHVPHGQ GSIVL
001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK
Arabidopsis Description
YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.