Factsheet for HORVU7Hr1G089600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
BAV58133	Barley	endoplasmic reticulum, extracellular	97.44	97.44
TraesCS3A01G142300.1	Wheat	extracellular, plasma membrane	95.51	95.51
TraesCS2D01G230200.1	Wheat	extracellular, golgi	94.87	94.87
TraesCS7B01G051100.1	Wheat	endoplasmic reticulum, extracellular	93.59	93.59
TraesCS3B01G430700.1	Wheat	endoplasmic reticulum, extracellular	92.95	93.55
TraesCS4B01G146500.1	Wheat	extracellular	92.31	92.31
GRMZM5G816772_P01	Maize	extracellular	90.38	92.16
TraesCS6D01G168600.1	Wheat	extracellular, plasma membrane	91.67	91.67
TraesCS3D01G410500.1	Wheat	extracellular, plasma membrane	91.67	91.67
BAC19860	Rice	plasma membrane	90.38	90.97
HORVU4Hr1G059430.1	Barley	extracellular, golgi	89.74	89.74
TraesCS7A01G164600.1	Wheat	extracellular	83.97	83.97
HORVU6Hr1G039040.1	Barley	cytosol	64.1	79.37
VIT_01s0146g00390.t01	Wine grape	extracellular	71.79	70.44
AT2G07707.1	Thale cress	extracellular	71.15	70.25
ATMG00480.1	Thale cress	extracellular	71.15	70.25
VIT_00s0246g00220.t01	Wine grape	extracellular	71.15	69.81
PGSC0003DMT400029511	Potato	extracellular	68.59	68.59
GSMUA_AchrUn_...	Banana	extracellular	67.95	65.84
PGSC0003DMT400034190	Potato	cytosol	22.44	62.5
KRH62975	Soybean	endoplasmic reticulum, mitochondrion	41.03	50.79
CDY45297	Canola	extracellular	27.56	44.33
HORVU2Hr1G034000.1	Barley	cytosol	33.33	40.94
CDY65732	Canola	endoplasmic reticulum, extracellular, golgi	43.59	15.67
ATMG00500.1	Thale cress	mitochondrion	11.54	12.77
AT2G07708.1	Thale cress	mitochondrion	11.54	12.77

Protein Annotations

EnsemblPlants:HORVU7Hr1G089600.1	EnsemblPlantsGene:HORVU7Hr1G089600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0016020	GO:GO:0016021	InterPro:YMF19	InterPro:YMF19-like_N	KEGG:00190+3.6.3.14
KEGG:00195+3.6.3.14	PANTHER:PTHR36816	PFAM:PF02326	PFAM:PF06449	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B47DD1F	UniProt:A0A287X9F0	MapMan:2.4.6.1.6	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:544953030..544953654

Molecular Weight (calculated)

18045.1 Da

IEP (calculated)

10.335

GRAVY (calculated)

-0.158

Length

156 amino acids

Sequence
(BLAST)

001: MPQLDKLTYF SQFFWLCLLL FTFYILLFNN NNGILGISRI LKLRNQLLSR RGGXIRSKDP KNLEDISRKR LSTGLSYMYS SLSEVSQWCK TVDYLGKRRK
101: ITLISDFSEI SGSREMERQI LYLISKSSYN TSSSRITCWK NIMLTHVPHG EGSIIL

Best Arabidopsis Sequence Match ( ATMG00480.1 )
(BLAST)

001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK

Arabidopsis Description

YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.