Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| BAV58133 | Barley | endoplasmic reticulum, extracellular | 82.54 | 66.67 |
| TraesCS5A01G430400.1 | Wheat | extracellular | 80.16 | 64.74 |
| TraesCS5A01G020100.1 | Wheat | golgi | 80.16 | 64.74 |
| TraesCS2B01G265400.1 | Wheat | extracellular, golgi | 79.37 | 64.52 |
| TraesCSU01G245500.1 | Wheat | extracellular | 79.37 | 64.1 |
| TraesCS1A01G140100.1 | Wheat | extracellular, golgi | 79.37 | 64.1 |
| HORVU7Hr1G089600.1 | Barley | extracellular | 79.37 | 64.1 |
| TraesCS7D01G464300.1 | Wheat | extracellular, vacuole | 78.57 | 63.46 |
| BAC19860 | Rice | plasma membrane | 77.78 | 63.23 |
| GRMZM5G816772_P01 | Maize | extracellular | 76.19 | 62.75 |
| TraesCS3D01G520800.1 | Wheat | extracellular, vacuole | 75.4 | 60.9 |
| PGSC0003DMT400034190 | Potato | cytosol | 26.98 | 60.71 |
| HORVU4Hr1G059430.1 | Barley | extracellular, golgi | 74.6 | 60.26 |
| VIT_01s0146g00390.t01 | Wine grape | extracellular | 60.32 | 47.8 |
| VIT_00s0246g00220.t01 | Wine grape | extracellular | 59.52 | 47.17 |
| ATMG00480.1 | Thale cress | extracellular | 58.73 | 46.84 |
| AT2G07707.1 | Thale cress | extracellular | 58.73 | 46.84 |
| PGSC0003DMT400029511 | Potato | extracellular | 57.14 | 46.15 |
| GSMUA_AchrUn_... | Banana | extracellular | 58.73 | 45.96 |
| CDY45297 | Canola | extracellular | 29.37 | 38.14 |
| HORVU2Hr1G034000.1 | Barley | cytosol | 34.13 | 33.86 |
| KRH62975 | Soybean | endoplasmic reticulum, mitochondrion | 30.16 | 30.16 |
| ATMG00500.1 | Thale cress | mitochondrion | 10.32 | 9.22 |
| AT2G07708.1 | Thale cress | mitochondrion | 10.32 | 9.22 |
| CDY65732 | Canola | endoplasmic reticulum, extracellular, golgi | 27.78 | 8.06 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G039040.1 | EnsemblPlantsGene:HORVU6Hr1G039040 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0016020 | GO:GO:0016021 | InterPro:YMF19 | KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 |
| PANTHER:PTHR36816 | PFAM:PF06449 | UniParc:UPI000B48401A | UniProt:A0A287TZE9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr6H:-:201244222..201244791
Molecular Weight (calculated)
14265.1 Da
IEP (calculated)
8.615
GRAVY (calculated)
-0.299
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYLELAEFS NYGTNCFRAG VGGEIRTKDP KNLEDISRKG FSTGLSYMYS NLSEVSQWCK TIDYLGKRRK VTLIFDFSEI SGSRGMERQI LCLISKSSYN
101: TSSSRITCWK NIMLAHVPHG EGSIIL
101: TSSSRITCWK NIMLAHVPHG EGSIIL
001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK
Arabidopsis Description
YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.