Factsheet for HORVU4Hr1G059430.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
BAV58133	Barley	endoplasmic reticulum, extracellular	91.03	91.03
HORVU7Hr1G089600.1	Barley	extracellular	89.74	89.74
TraesCS3A01G142300.1	Wheat	extracellular, plasma membrane	89.1	89.1
TraesCS2D01G230200.1	Wheat	extracellular, golgi	88.46	88.46
TraesCS7B01G051100.1	Wheat	endoplasmic reticulum, extracellular	87.18	87.18
TraesCS3B01G430700.1	Wheat	endoplasmic reticulum, extracellular	86.54	87.1
GRMZM5G816772_P01	Maize	extracellular	85.26	86.93
TraesCS4B01G146500.1	Wheat	extracellular	85.9	85.9
BAC19860	Rice	plasma membrane	85.26	85.81
TraesCS6D01G168600.1	Wheat	extracellular, plasma membrane	85.26	85.26
TraesCS3D01G410500.1	Wheat	extracellular, plasma membrane	85.26	85.26
TraesCS7A01G164600.1	Wheat	extracellular	78.21	78.21
HORVU6Hr1G039040.1	Barley	cytosol	60.26	74.6
VIT_01s0146g00390.t01	Wine grape	extracellular	69.87	68.55
VIT_00s0246g00220.t01	Wine grape	extracellular	69.23	67.92
AT2G07707.1	Thale cress	extracellular	68.59	67.72
ATMG00480.1	Thale cress	extracellular	68.59	67.72
PGSC0003DMT400029511	Potato	extracellular	66.03	66.03
GSMUA_AchrUn_...	Banana	extracellular	65.38	63.35
PGSC0003DMT400034190	Potato	cytosol	20.51	57.14
KRH62975	Soybean	endoplasmic reticulum, mitochondrion	40.38	50.0
CDY45297	Canola	extracellular	25.64	41.24
HORVU2Hr1G034000.1	Barley	cytosol	33.33	40.94
CDY65732	Canola	endoplasmic reticulum, extracellular, golgi	41.03	14.75
ATMG00500.1	Thale cress	mitochondrion	12.82	14.18
AT2G07708.1	Thale cress	mitochondrion	12.82	14.18

Protein Annotations

EnsemblPlants:HORVU4Hr1G059430.1	EnsemblPlantsGene:HORVU4Hr1G059430	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0016020	GO:GO:0016021	InterPro:YMF19	InterPro:YMF19-like_N	KEGG:00190+3.6.3.14
KEGG:00195+3.6.3.14	PANTHER:PTHR36816	PFAM:PF02326	PFAM:PF06449	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B471190	UniProt:A0A287P9N6	MapMan:2.4.6.1.6	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:497402704..497403511

Molecular Weight (calculated)

17958.1 Da

IEP (calculated)

10.349

GRAVY (calculated)

-0.032

Length

156 amino acids

Sequence
(BLAST)

001: MPQLDKLTYF SQLFWLYLLL FTFCILLFNN NNGILGISRI LKLRNQLLSR RGGGIRSKDP KNLEDISRKG FSIGLSYMYS SLSEVSQWCK IVDYLGKRRK
101: ITLIYDFSKI SGSRAMERQI LYLISKSSYN TSSNWITCGK NVMLTHVPHG EGSIIL

Best Arabidopsis Sequence Match ( ATMG00480.1 )
(BLAST)

001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK

Arabidopsis Description

YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.