Factsheet for TraesCS7A01G164600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430700.1	Wheat	endoplasmic reticulum, extracellular	87.18	87.74
TraesCS7B01G051100.1	Wheat	endoplasmic reticulum, extracellular	87.18	87.18
TraesCS3A01G142300.1	Wheat	extracellular, plasma membrane	87.18	87.18
TraesCS5A01G020100.1	Wheat	golgi	87.18	87.18
TraesCS4B01G146500.1	Wheat	extracellular	86.54	86.54
BAV58133	Barley	endoplasmic reticulum, extracellular	86.54	86.54
TraesCS6D01G168600.1	Wheat	extracellular, plasma membrane	86.54	86.54
TraesCS5A01G430400.1	Wheat	extracellular	86.54	86.54
TraesCS3D01G410500.1	Wheat	extracellular, plasma membrane	85.9	85.9
TraesCS1A01G140100.1	Wheat	extracellular, golgi	85.9	85.9
GRMZM5G816772_P01	Maize	extracellular	82.69	84.31
HORVU7Hr1G089600.1	Barley	extracellular	83.97	83.97
BAC19860	Rice	plasma membrane	82.69	83.23
HORVU4Hr1G059430.1	Barley	extracellular, golgi	78.21	78.21
PGSC0003DMT400034190	Potato	cytosol	24.36	67.86
VIT_01s0146g00390.t01	Wine grape	extracellular	66.03	64.78
VIT_00s0246g00220.t01	Wine grape	extracellular	65.38	64.15
AT2G07707.1	Thale cress	extracellular	64.1	63.29
ATMG00480.1	Thale cress	extracellular	64.1	63.29
PGSC0003DMT400029511	Potato	extracellular	62.18	62.18
GSMUA_AchrUn_...	Banana	extracellular	62.82	60.87
CDY45297	Canola	extracellular	28.21	45.36
KRH62975	Soybean	endoplasmic reticulum, mitochondrion	35.9	44.44
CDY65732	Canola	endoplasmic reticulum, extracellular, golgi	36.54	13.13
ATMG00500.1	Thale cress	mitochondrion	10.26	11.35
AT2G07708.1	Thale cress	mitochondrion	10.26	11.35

Protein Annotations

EnsemblPlants:TraesCS7A01G164600.1	EnsemblPlantsGene:TraesCS7A01G164600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0016020	GO:GO:0016021	InterPro:YMF19	InterPro:YMF19-like_N	KEGG:00190+3.6.3.14
KEGG:00195+3.6.3.14	PANTHER:PTHR36816	PFAM:PF02326	PFAM:PF06449	SEG:seg	TMHMM:TMhelix
MapMan:2.4.6.1.6	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:120865884..120866619

Molecular Weight (calculated)

16327.8 Da

IEP (calculated)

9.390

GRAVY (calculated)

-0.063

Length

156 amino acids

Sequence
(BLAST)

001: MPQLDKLTYF SQFFWLCLLL FTFYILLFNN NNGILGIXXX XXXXXXXXXX GGGEIQSKEP KNLEDISRKG FSTGLSYMYS SLSEISQWCK TIDYLGKRRK
101: ITLISDFGEI SGSRGMERQI LYLISKSSYN TSSSRITCWK NIMLTHVPHG QGSIVL

Best Arabidopsis Sequence Match ( AT2G07707.1 )
(BLAST)

001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK

Arabidopsis Description

YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.